ChiP-Seq Analysis- Day 2
Рет қаралды 6,819
4 жыл бұрынThis workshop aims to provide skills needed to address principles of the assay, quality assessment, sequencing depth, data processing and functional downstream analyses of ChIP-seq datasets. Students will have opportunities to practice hands-on with state-of-the-art analytical tools.
@ShubhamVerma-ml3kb 2 жыл бұрын
It's just awesome. The best tutorial for ChIP Seq
@chaoxu6999 2 жыл бұрын
Very Thank you for the sharing . Where can I get the learning materials?
@paolacarneiro9815 2 жыл бұрын
The GEO dataset has all the files that he used in this tutorial. See ChiP-Seq Analysis- Day 1, you will find the GSE31477 and the explication provided. :)
@annadevisser709 5 ай бұрын
On around 25 minutes, you're talking about normalizing aligned files. How would you normally do it if you don't want to speed up the process?
@priyansharajsinha1159 4 ай бұрын
Can you please share the url of CEAS website. It's not as given in their research paper. Or any alternative tool.
@nancyanderson5413 Ай бұрын
you will have to do it in conda: conda install cistrome-ceas, but before you do it you will have to create a conda environment with python2, and then call the environment with pithon2 and install cistrome-ceas there. And when you run the program you have to initiate your conda environment where python2 is: conda create -n old_python python=2.7 conda activate old_python conda install cistrome-ceas
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