If you are using magnetic beads, you don't need to do centrifugation. it would be separated by a magnet only. In the case of agarose beads, you would need centrifugation.
@novar77394 жыл бұрын
6 in-depth lecture slides couldn't help with what you did in 4 minutes! Thank you so much.
@animatedbiologywitharpan4 жыл бұрын
Nova Roemer please support me by sharing my channel link with your friends and juniors
@animatedbiologywitharpan4 жыл бұрын
Nova Roemer do watch my other playlists , as I have variety of contents which may be useful
@jacquelinelabovitz46136 жыл бұрын
BEST EXPLANATION I'VE GOTTEN! THANK YOU!
@animatedbiologywitharpan6 жыл бұрын
glad to know it helped you.....share with friends and help them as well....happy learning
@sadafbahadori14534 жыл бұрын
That was great
@mubashirjaved633 жыл бұрын
Can you please explain how beta actin will be present in the lysates when we only pulled our protein of interest with the beads, all other proteins will be in the supernatant which we will discard or not use for this particular gel. We will run only those proteins which are in pellet and i think beta actin wont be presnt in pellet?
@chunchom.s4 жыл бұрын
You save me! Really thank you Your video is precious!!
@animatedbiologywitharpan4 жыл бұрын
if you share my channel link with your friends or college group ....many people can get help and it would help me to reach big audiance
@animeloverXinuyasha4 жыл бұрын
Lovely diagrams and nice clear explanation!
@AAAdeeno3 жыл бұрын
Very good explanation, thank you so much, and the diagrams are so neatly-drawn too! Was so confused about co-IP and IP before this haha. Thank you!
@animatedbiologywitharpan3 жыл бұрын
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@paulchang87434 жыл бұрын
how do you justify the pH of the buffer to make sure that protein A and B are not dissociated?
@naboclare4 жыл бұрын
hello! thank you very much for posting these explanations on youtube. just watched the long term potentiation (LTP) and this one about CO-IP and it helped me a lot! just subscribed :)
@animatedbiologywitharpan4 жыл бұрын
Please share among your friends and help me to reach big audiance
@j2zel5 жыл бұрын
Great video! Super clear and easy to follow... I also liked your diagrams. Thanks for sharing
@animatedbiologywitharpan5 жыл бұрын
Thanks.... good to know that it helped...now share among friends to help them as well
@mahatai99045 жыл бұрын
I don't understand why we need a second antibody for protein B! Would it not show anyway on the SDS Page? Or did I miss something?!
@DiemNguyen-gg8gy3 жыл бұрын
Thank you so much for the clear explanation! You saved my course!!!!
@animatedbiologywitharpan3 жыл бұрын
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@iyXi0823dqx2 жыл бұрын
The difference between Pull-down and CoIp is that pull-down using solution from eluted beads, and CoIp uses the precipitate after centrifuge. Then both of them go to SDS-PAGE, is that right?
@khandkermohammadkhalid1753 жыл бұрын
Do you pull down beta actin too with the beads? How do you get beta actin in an IP blot?
@ambergupta86396 жыл бұрын
If we dont know which protein is interacted with Protein A then how we can use the antibody against the unknown protein. In this case we can only go for sequencing the SDS PAGE bands interacted with Protein A
@Echodonut5 жыл бұрын
You would have to go with mass spectrometry though. Sequencing is used on genetic material, not on proteins.
@aadam36577 жыл бұрын
thank you brother!
@luciacarreno12685 жыл бұрын
thanks a lot! from Argentina!!
@animatedbiologywitharpan5 жыл бұрын
Glad to hear that my video helped..... share among friends as well
@taranehallahdadi79585 жыл бұрын
Thank you so much for this clear explanation!
@animatedbiologywitharpan5 жыл бұрын
Glad to hear that you found it useful
@fatnmchollandl65054 жыл бұрын
The best explanation l have found. Thank you
@animatedbiologywitharpan4 жыл бұрын
Fatn McHollandl please share and subscribe to my channel
@allienikole184 жыл бұрын
This was PERFECT! Thank you! Also you have very nice handwriting!
@animatedbiologywitharpan4 жыл бұрын
please share among friends and help me to reach big audiance
@allienikole184 жыл бұрын
@@animatedbiologywitharpan absolutely!
@jasonxlll581610 ай бұрын
Lourd la vidéo, ça m'a mis bien 👍
@maymaung4763 жыл бұрын
Thanks a lot. your videos are really helpful for young researchers.
@animatedbiologywitharpan3 жыл бұрын
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@fabriciolima4013 жыл бұрын
thanks this is short, concise and logical, made it easy to understand
@animatedbiologywitharpan3 жыл бұрын
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@CancerSleuth4 жыл бұрын
4:53 how will you get any B-actin band from an immunoprecipitated sample? if b-actin is present this simply means that b-actin is also interacting with the protein A, which is WRONG!
@tsamchoe16384 жыл бұрын
very true.
@CancerSleuth4 жыл бұрын
Use IgG heavy chain as a loading control or simply immunoblot [WB] the precipitating protein (here A) to observe that protein A is present in equal amount in all the lanes.
@netaburnum13597 жыл бұрын
Co-immunoprecipitation (Co-IP) is a popular technique to identify physiologically relevant protein-protein interactions by using target protein-specific antibodies to indirectly capture proteins that are bound to a specific target protein.
@fahimakhan26213 жыл бұрын
Explained very clearly thank you!
@animatedbiologywitharpan3 жыл бұрын
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@hadeelkhalouf21042 жыл бұрын
a very straightforward video ! thanks a lot !
@animatedbiologywitharpan2 жыл бұрын
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@lamialime19843 жыл бұрын
Im a medical student,Thank you so much for this video❤️❤️❤️❤️it helps a lott!
@animatedbiologywitharpan3 жыл бұрын
Please share among friends and help me to reach big audience
@animatedbiologywitharpan3 жыл бұрын
Do checkout my other playlists
@CR-uu1rr Жыл бұрын
Very useful and excellent explanation. Thanks a lot 👌
@animatedbiologywitharpan Жыл бұрын
Please share my channel link with your friends and help me to reach big audiance. Don't forget to subscribe
@oussamakherbouche65623 жыл бұрын
YOU SIR ARE GENIUS !
@animatedbiologywitharpan3 жыл бұрын
Thanks a lot for the complement. Unfortunately I am not able to reach a big audience somehow...please help me by sharing my channel link with your friends.
@animatedbiologywitharpan3 жыл бұрын
Check out all my playlist...you would definitely find topics of your interest
@fabriciolima4013 жыл бұрын
actin is used just to make sure the proteins you are testing presence for were loaded correctly on the blot?
@animatedbiologywitharpan3 жыл бұрын
Actin is a housekeeping protein so it’s not expected to change
@giuliablandino45266 жыл бұрын
It's fantastic thanks!
@animatedbiologywitharpan2 жыл бұрын
Most welcome! Please share with your friends to help my channel grow...😇
@veedhisolanki51073 жыл бұрын
very helpful video, the only video explains co-IP with western blot!
@animatedbiologywitharpan3 жыл бұрын
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@traveladventure18185 жыл бұрын
Very nice presentation
@xchen86604 жыл бұрын
Love your hand drawing!
@animatedbiologywitharpan4 жыл бұрын
Please share among your friends and help me to reach big audience
@eyupyondem48184 жыл бұрын
Thank you man, it will facilitate my presentation. You are the best :))
@animatedbiologywitharpan4 жыл бұрын
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@aleksandrasokolova54922 жыл бұрын
Thanks for explanation! It was really helpful
@animatedbiologywitharpan2 жыл бұрын
Pleaae share my channel link with your friends and help me to reach big audiance
@Segimaru6 жыл бұрын
Thank you for this video.
@animatedbiologywitharpan2 жыл бұрын
Most welcome! Please share with your friends to help my channel grow...😇
@evanmcsharry10157 жыл бұрын
Where is protein A on the blot? How is A not blotted?
@jacobi_official85907 жыл бұрын
the target was B. thats why the antibody spotted just B in the western blot. A is there but the antibody wasn't directed against it. a positive band for B (considering that A was pulled down initially) shows there is interaction between A and B
@rajeshpalgp1207 жыл бұрын
good job brah...keep uploading
@AZ-qx1xd3 жыл бұрын
thank you!
@animatedbiologywitharpan3 жыл бұрын
Please share among friends and help me to reach big audience
@fatcammal3 ай бұрын
OH MY GOD THIS IS SO GOOD!!!!!!!!!!!!!!!!!!!! THANK YOU!!!!!!!!!!!!!
@animatedbiologywitharpan3 ай бұрын
Could you please help me by sharing my contents with your friends group/ college group. I put huge efforts in making these videos but unfortunately not a lot of people are watching this.
@fatcammal3 ай бұрын
@@animatedbiologywitharpan anytime i search up biology content, this girl "bumbling biochemist" pops up. her stupidly long videos monopolize biology content, I swear, every single topic i search up i see her face.
@caillouaudacieux3 жыл бұрын
Super useful, thank you !!
@animatedbiologywitharpan3 жыл бұрын
Please share my channel link with your friends and help me to reach big audience
@johnwilliams50645 жыл бұрын
Thanks
@thomasprovoost71193 жыл бұрын
Do you have this information from a source? If so, which one? Can you send me the link please
@thomasprovoost71193 жыл бұрын
You liked my reaction, but you don't answer?
@jacknicholls45144 жыл бұрын
So helpful, thanks!
@animatedbiologywitharpan4 жыл бұрын
Don’t forget to checkout my other playlists
@swatijagani97163 жыл бұрын
Thanks for the very nice video. But I have a question. How can we detect unknown protein bound to the know protein in co immunoprecipitation ?
@animatedbiologywitharpan3 жыл бұрын
Atleast you need to have one known protein which you would pull down and look for interactors via mass spec
@arianahouman79143 жыл бұрын
Thank you, sir :)
@animatedbiologywitharpan3 жыл бұрын
Please share among friends and help me to reach big audience
@suryakantsonwanii Жыл бұрын
How we select antibody for a protein, How we can sure that our antibody interact with our protein??
@animatedbiologywitharpan Жыл бұрын
kzfaq.info/get/bejne/i51mf89ktNumo4k.html
@emanelkafoury68914 жыл бұрын
thank you
@animatedbiologywitharpan4 жыл бұрын
Please share among your friends
@sksahidurrahaman79253 жыл бұрын
Nicely explained explained. Could have been better if the importance of running input in the same gel was also given.
@animatedbiologywitharpan3 жыл бұрын
I agree with your suggestion.
@koy30802 жыл бұрын
tell me are u from India? what is that accent??? i need to know
@animatedbiologywitharpan2 жыл бұрын
Yes I am Indian, sorry if my accent has bothered you.
@InquilineKea3 жыл бұрын
does this only work for covalent interactions?
@animatedbiologywitharpan3 жыл бұрын
No no generally protein protein interactions are non covalent.
@marioalbertoleosramirez15693 жыл бұрын
THANKS! NOW I CAN UNDERSTAND A PAPER THAT I HAVE TO READ xD
@animatedbiologywitharpan3 жыл бұрын
Please share my channel link with your friends and help me to reach big audience
@lukeshwarishriwas28964 жыл бұрын
Sir it is in vitro technique????
@animatedbiologywitharpan4 жыл бұрын
Could be used for in vitro or in vivo
@firdausahmed5814 жыл бұрын
What is the purpose of using beta actin in this assay sir?
@animatedbiologywitharpan4 жыл бұрын
It's a house keeping control......you can imagine it to be standard scale
@solimanalobaid62904 жыл бұрын
Helpful 👌
@animatedbiologywitharpan4 жыл бұрын
Please share among your friends and help me to reach big audience
@hopeaddict13227 жыл бұрын
r u from Presidency? very good keep up the good work bro..👍
@animatedbiologywitharpan7 жыл бұрын
I am from TIFR
@victoriamola73023 жыл бұрын
you save me!
@animatedbiologywitharpan3 жыл бұрын
Please share my channel link with your friends and help me to reach big audience
@michaelagunther48004 жыл бұрын
great explanation
@animatedbiologywitharpan4 жыл бұрын
Please share my channel link with your friends and help me to reach big audience
@animatedbiologywitharpan4 жыл бұрын
Do explore my other playlists and you might find something very useful
@usernamenishta-44114 жыл бұрын
Amazing explanation, however, isn't this an in-vitro technique? Literally everything is happening outside of the body, in a test tube etc. Thanks, nonetheless.
@animatedbiologywitharpan4 жыл бұрын
Nope ...you got it wrong..... this method can be used to detect both in vitro and in vivo protein protein interaction....
@animatedbiologywitharpan4 жыл бұрын
When you are doing from a cell lysate or tissue homogenate then it’s trying to detect the interactions in vivo, while you are doing with purified protein in test tube it’s in vitro....
@animatedbiologywitharpan4 жыл бұрын
The interaction between proteins could be either in vivo or in vitro but a technique is never in vitro / invivo.....I hope this answers your doubt.....
@usernamenishta-44114 жыл бұрын
@@animatedbiologywitharpan ohhh okay. Yes that clears the confusion. Thankyouu 😊😊
@usernamenishta-44114 жыл бұрын
@@animatedbiologywitharpan ive been taught something so different 😂😂😂 and ive a paper in about an hour.
@tesconstamylo7 жыл бұрын
so by this way you describe yo identify the complex AB not their interaction as say !!!
@AlvinCwk3 жыл бұрын
Who teaches better? A. Your professor majored in biotechnology with 10+ years teaching experience Or B. A random indian boi on youtube
@animatedbiologywitharpan3 жыл бұрын
It depends on the audiance
@faakehakhan74606 жыл бұрын
what is this accent ?
@animatedbiologywitharpan6 жыл бұрын
fakeha khan this is Bengali accent....sorry for that
@biaohuanzhou42247 жыл бұрын
good presetation, except some accent, but it's good. thanks.
@JEPTEPKENY2 жыл бұрын
QuickQuestion You are studying 3 proteins (A, B and C). You hypothesize that A binds to B (forming a complex AB) but not C. From the scientific literature you know that B does not interact with C. 1) You are able to obtain 100% pure preparations of proteins A, B and C. Which experimental technique would you use to prove/disprove your hypothesis? Describe the experiment and the expected results
@animatedbiologywitharpan2 жыл бұрын
Email me at arpanparichha1994@gmail.com. we can interact further