How to calculate Vmax and Km from a Lineweaver-Burk plot

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Nigel Francis

Nigel Francis

Күн бұрын

A step by step guide for calculating Vmax and Km from a Lineweaver-Burk plot in Excel

Пікірлер: 63
@kaceybremner7514
@kaceybremner7514 3 жыл бұрын
Explained better than any of my lecturers. You made it so simple !!!!
@NigelFrancis
@NigelFrancis 3 жыл бұрын
Glad I could help you understand it
@gutsandglory7507
@gutsandglory7507 2 жыл бұрын
Let them hear you. I come in peace. thank you DR for well explanation.
@TheOriginalGeekGaming
@TheOriginalGeekGaming 2 жыл бұрын
You just saved my life, this is hands down the best description i've seen!
@NigelFrancis
@NigelFrancis 2 жыл бұрын
Very kind of you! I’m glad you found it helpful.
@rat6508
@rat6508 3 ай бұрын
Thank you genuinely so much this was so straight forward!!!
@NigelFrancis
@NigelFrancis 2 ай бұрын
I'm glad you found it helpful
@saraavila399
@saraavila399 2 жыл бұрын
Thank you so much for explaining this I needed it!
@NigelFrancis
@NigelFrancis 2 жыл бұрын
Really glad it helped you!
@alfinrochmania9519
@alfinrochmania9519 3 жыл бұрын
Finally i'm understand. Thank you so much. God Bless You!!
@NigelFrancis
@NigelFrancis 3 жыл бұрын
Glad I could help!
@njerikimemia8692
@njerikimemia8692 3 жыл бұрын
you made it so simple! Thank you!
@NigelFrancis
@NigelFrancis 3 жыл бұрын
Glad you found it useful
@GridnetGaming
@GridnetGaming Жыл бұрын
Thank you, I was stuck on finding vmax, this helped
@NigelFrancis
@NigelFrancis Жыл бұрын
Glad it helped you!
@ysabaxxx6899
@ysabaxxx6899 Жыл бұрын
Thank you for this!
@NigelFrancis
@NigelFrancis Жыл бұрын
I'm glad it helped you
@chawanangwachiponyirenda2808
@chawanangwachiponyirenda2808 Жыл бұрын
This is really helpful thank you 😩
@NigelFrancis
@NigelFrancis Жыл бұрын
Glad it helped you
@lllllllll1150
@lllllllll1150 3 жыл бұрын
Thanks sir, i needed this very badly 😭😭💯
@NigelFrancis
@NigelFrancis 3 жыл бұрын
Glad it helped you
@Gs-Kerai
@Gs-Kerai 2 жыл бұрын
One of the best from rest😎
@NigelFrancis
@NigelFrancis 2 жыл бұрын
Glad it helped you
@Violet-zj7no
@Violet-zj7no 3 жыл бұрын
Thanks Sir. This really help me
@NigelFrancis
@NigelFrancis 3 жыл бұрын
Glad it helped you
@lewishayter
@lewishayter 3 жыл бұрын
Thank you so much :)
@NigelFrancis
@NigelFrancis 3 жыл бұрын
You’re welcome, hope you found it useful
@Botmoppertheking
@Botmoppertheking Жыл бұрын
thank you so much my man
@NigelFrancis
@NigelFrancis Жыл бұрын
You're welcome
@concurseiroentropy4483
@concurseiroentropy4483 3 жыл бұрын
Very nice!!!!
@NigelFrancis
@NigelFrancis 3 жыл бұрын
Glad you liked it
@abinavaluna
@abinavaluna 8 ай бұрын
thank you very much
@NigelFrancis
@NigelFrancis 8 ай бұрын
You’re very welcome! I’m glad you found the video useful
@yonetmen
@yonetmen 3 жыл бұрын
A question: I have two purified enzymes with unknown concentrations. If I determine the Km and Vmax as you did in this video, are these values comparable to each other? Or I really must use equal amount of enzymes? I know Km is independent of enzyme amount but what if it comes to comparison? Thanks in advance!
@NigelFrancis
@NigelFrancis 3 жыл бұрын
An interesting question, the Vmax will depend on the concentration of active enzyme present so it is not really appropriate to directly compare, Some people try to get around this by expressing as per ug of protein, but then this is not strictly Vmax.
@yonetmen
@yonetmen 3 жыл бұрын
@@NigelFrancis Thank you!
@RicardoBrancal
@RicardoBrancal 4 жыл бұрын
What are the units your using for velocity? mines are umol/min*gcells because my enzyme is whole-cell
@NigelFrancis
@NigelFrancis 4 жыл бұрын
Off top of my head is either nanomoles/min or micromoles/min. This example data was generated using purified enzyme.
@RicardoBrancal
@RicardoBrancal 4 жыл бұрын
@@NigelFrancis my enzymes came in wet cells extract thats why
@israadaffaie5037
@israadaffaie5037 3 жыл бұрын
Thank you
@NigelFrancis
@NigelFrancis 3 жыл бұрын
You’re welcome, hope you found the video helpful
@angshulsana
@angshulsana 7 ай бұрын
Use the Michaelis-Menton Equation to calculate the missing values of [S] given below if Vmax = 5mmol/min. Plot V versus [S]. draw a line parallel to the x-axis at V max and extend your plotted line to show its approach to Vmax
@NigelFrancis
@NigelFrancis 7 ай бұрын
Except this is only an approximation as MM plots never truly plateau
@matthewschmitz1756
@matthewschmitz1756 3 жыл бұрын
Bravo my friend
@NigelFrancis
@NigelFrancis 3 жыл бұрын
Glad you liked it
@taufiqulhuque5719
@taufiqulhuque5719 Жыл бұрын
You can also get the exact values of the intercepts by setting x equal to zero, and then setting y equal to zero, in the trendline equation.
@NigelFrancis
@NigelFrancis Жыл бұрын
Yes, you can and this is how I calculated the values for the forecasts.
@taufiqulhuque5719
@taufiqulhuque5719 Жыл бұрын
@@NigelFrancis Of course the advantage of your method is that one has the satisfaction of seeing a traditional L-B plot emerge. Thank you for a superb click-by-click demo of the procedure.
@dev5966
@dev5966 3 жыл бұрын
nice very nice
@NigelFrancis
@NigelFrancis 3 жыл бұрын
Glad you liked it!
@EsraaAlzoubi-oz3sp
@EsraaAlzoubi-oz3sp 2 жыл бұрын
can you please show me how (Km=(-1)/Km) will be like?
@NigelFrancis
@NigelFrancis 2 жыл бұрын
Hi there, do you mean an example of how to perform the calculation or how the relationship itself is derived?
@zaysiz
@zaysiz 3 жыл бұрын
Sometimes, I get LB plot equation as y=ax-b. Not y=ax+b . Why is it negative? If i include more reaction (with differently substrate amount), I am getting so differently values. Why is it changing so easly?
@zaysiz
@zaysiz 3 жыл бұрын
For example; When I use; My substrate column; 1, 2, 3, 4, 5, 6 mM. Velocity column; 0.25, 0.55, 0.75, 0.92, 1.05, 1.138, 1,14 Vmax: 5,042 Km: 18,59 When I use; My substrate column; 0.1, 0.3, 0.5, 1, 2, 3, 4, 5, 6 mM. Velocity column; 0.06, 0.09, 0.11, 0.25, 0.55, 0.75, 0.92, 1.05, 1.138, 1,14 Vmax : 0,567 Km: 0,954 So differently, Why?
@NigelFrancis
@NigelFrancis 3 жыл бұрын
@@zaysiz the short answer is that you cannot have a negative intercept if the enzyme is indeed michealian. Are you absolutely sure about your substrate concentrations? If you’re overestimating, especially at low concentrations this could shift the curve and give the result you describe. The LB plot has a weakness in that the distribution of points is uneven and there is a greater emphasis on lower concentrations, which are inherently more difficult to determine accurately. You could try Eadie or Hanes plots to check your answers.
@zaysiz
@zaysiz 3 жыл бұрын
@@NigelFrancis Thank you for your answer. MM graph looks normal. If I neglect some reactions with low substrate concentration, become LB plot equation to y=ax+b. Should I neglect them for y=ax+b equation? I learned on the internet how to calculate km vmax by Eadie and tried Eadie Hofstee plot. Equation looks normal but I am not sure of the accuracy. I wonder before everything, Do you say that I can not calculate Km and Vmax by y=ax-b equation. I should change substrate concentrations and have to fix the equation for y=ax+b, haven't I?
@NigelFrancis
@NigelFrancis 3 жыл бұрын
@@zaysiz You cannot calculate Vmax from a negative y-intercept as the intercept point is 1/Vmax. I suspect that there is either an error in the experimental procedure or that the concentration of the substrate is incorrect and is causing errors that are magnified at the lower concentrations due to the bias in the LB plot.
@zaysiz
@zaysiz 3 жыл бұрын
​@@NigelFrancis Thank you so much for your interest.
@chawanangwachiponyirenda2808
@chawanangwachiponyirenda2808 Жыл бұрын
How did you find the gradient on the equation without using excel please help
@NigelFrancis
@NigelFrancis Жыл бұрын
The gradient ‘m’ can be calculated using the equation (y2 - y1)/(x2 - x1). I hope that answers your question?
@chawanangwachiponyirenda2808
@chawanangwachiponyirenda2808 Жыл бұрын
@@NigelFrancis thank you so much
@lukefuller8068
@lukefuller8068 2 жыл бұрын
why is the Km higher than Vmax, I thought km was 1/2 max?
@NigelFrancis
@NigelFrancis 2 жыл бұрын
Vmax and Km have different units, Vmax is normally expressed as a unit of concentration/a unit of time (e.g.micromoles/second). Km on the other hand is expressed as a unit of concentration (e.g. micromoles). The Michaelis-Menten plot allows you to approximate Km from the 1/2 Vmax value e.g. if Vmax was 100 then the concentration that would be equivalent to Km would be that where Vmax is equal to 50. It does not mean that Km is exactly equal to the value of 1/2 Vmax. Hope that helps?
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