A step by step guide for calculating Vmax and Km from a Lineweaver-Burk plot in Excel
Пікірлер: 63
@kaceybremner75143 жыл бұрын
Explained better than any of my lecturers. You made it so simple !!!!
@NigelFrancis3 жыл бұрын
Glad I could help you understand it
@gutsandglory75072 жыл бұрын
Let them hear you. I come in peace. thank you DR for well explanation.
@TheOriginalGeekGaming2 жыл бұрын
You just saved my life, this is hands down the best description i've seen!
@NigelFrancis2 жыл бұрын
Very kind of you! I’m glad you found it helpful.
@rat65083 ай бұрын
Thank you genuinely so much this was so straight forward!!!
@NigelFrancis2 ай бұрын
I'm glad you found it helpful
@saraavila3992 жыл бұрын
Thank you so much for explaining this I needed it!
@NigelFrancis2 жыл бұрын
Really glad it helped you!
@alfinrochmania95193 жыл бұрын
Finally i'm understand. Thank you so much. God Bless You!!
@NigelFrancis3 жыл бұрын
Glad I could help!
@njerikimemia86923 жыл бұрын
you made it so simple! Thank you!
@NigelFrancis3 жыл бұрын
Glad you found it useful
@GridnetGaming Жыл бұрын
Thank you, I was stuck on finding vmax, this helped
@NigelFrancis Жыл бұрын
Glad it helped you!
@ysabaxxx6899 Жыл бұрын
Thank you for this!
@NigelFrancis Жыл бұрын
I'm glad it helped you
@chawanangwachiponyirenda2808 Жыл бұрын
This is really helpful thank you 😩
@NigelFrancis Жыл бұрын
Glad it helped you
@lllllllll11503 жыл бұрын
Thanks sir, i needed this very badly 😭😭💯
@NigelFrancis3 жыл бұрын
Glad it helped you
@Gs-Kerai2 жыл бұрын
One of the best from rest😎
@NigelFrancis2 жыл бұрын
Glad it helped you
@Violet-zj7no3 жыл бұрын
Thanks Sir. This really help me
@NigelFrancis3 жыл бұрын
Glad it helped you
@lewishayter3 жыл бұрын
Thank you so much :)
@NigelFrancis3 жыл бұрын
You’re welcome, hope you found it useful
@Botmoppertheking Жыл бұрын
thank you so much my man
@NigelFrancis Жыл бұрын
You're welcome
@concurseiroentropy44833 жыл бұрын
Very nice!!!!
@NigelFrancis3 жыл бұрын
Glad you liked it
@abinavaluna8 ай бұрын
thank you very much
@NigelFrancis8 ай бұрын
You’re very welcome! I’m glad you found the video useful
@yonetmen3 жыл бұрын
A question: I have two purified enzymes with unknown concentrations. If I determine the Km and Vmax as you did in this video, are these values comparable to each other? Or I really must use equal amount of enzymes? I know Km is independent of enzyme amount but what if it comes to comparison? Thanks in advance!
@NigelFrancis3 жыл бұрын
An interesting question, the Vmax will depend on the concentration of active enzyme present so it is not really appropriate to directly compare, Some people try to get around this by expressing as per ug of protein, but then this is not strictly Vmax.
@yonetmen3 жыл бұрын
@@NigelFrancis Thank you!
@RicardoBrancal4 жыл бұрын
What are the units your using for velocity? mines are umol/min*gcells because my enzyme is whole-cell
@NigelFrancis4 жыл бұрын
Off top of my head is either nanomoles/min or micromoles/min. This example data was generated using purified enzyme.
@RicardoBrancal4 жыл бұрын
@@NigelFrancis my enzymes came in wet cells extract thats why
@israadaffaie50373 жыл бұрын
Thank you
@NigelFrancis3 жыл бұрын
You’re welcome, hope you found the video helpful
@angshulsana7 ай бұрын
Use the Michaelis-Menton Equation to calculate the missing values of [S] given below if Vmax = 5mmol/min. Plot V versus [S]. draw a line parallel to the x-axis at V max and extend your plotted line to show its approach to Vmax
@NigelFrancis7 ай бұрын
Except this is only an approximation as MM plots never truly plateau
@matthewschmitz17563 жыл бұрын
Bravo my friend
@NigelFrancis3 жыл бұрын
Glad you liked it
@taufiqulhuque5719 Жыл бұрын
You can also get the exact values of the intercepts by setting x equal to zero, and then setting y equal to zero, in the trendline equation.
@NigelFrancis Жыл бұрын
Yes, you can and this is how I calculated the values for the forecasts.
@taufiqulhuque5719 Жыл бұрын
@@NigelFrancis Of course the advantage of your method is that one has the satisfaction of seeing a traditional L-B plot emerge. Thank you for a superb click-by-click demo of the procedure.
@dev59663 жыл бұрын
nice very nice
@NigelFrancis3 жыл бұрын
Glad you liked it!
@EsraaAlzoubi-oz3sp2 жыл бұрын
can you please show me how (Km=(-1)/Km) will be like?
@NigelFrancis2 жыл бұрын
Hi there, do you mean an example of how to perform the calculation or how the relationship itself is derived?
@zaysiz3 жыл бұрын
Sometimes, I get LB plot equation as y=ax-b. Not y=ax+b . Why is it negative? If i include more reaction (with differently substrate amount), I am getting so differently values. Why is it changing so easly?
@zaysiz3 жыл бұрын
For example; When I use; My substrate column; 1, 2, 3, 4, 5, 6 mM. Velocity column; 0.25, 0.55, 0.75, 0.92, 1.05, 1.138, 1,14 Vmax: 5,042 Km: 18,59 When I use; My substrate column; 0.1, 0.3, 0.5, 1, 2, 3, 4, 5, 6 mM. Velocity column; 0.06, 0.09, 0.11, 0.25, 0.55, 0.75, 0.92, 1.05, 1.138, 1,14 Vmax : 0,567 Km: 0,954 So differently, Why?
@NigelFrancis3 жыл бұрын
@@zaysiz the short answer is that you cannot have a negative intercept if the enzyme is indeed michealian. Are you absolutely sure about your substrate concentrations? If you’re overestimating, especially at low concentrations this could shift the curve and give the result you describe. The LB plot has a weakness in that the distribution of points is uneven and there is a greater emphasis on lower concentrations, which are inherently more difficult to determine accurately. You could try Eadie or Hanes plots to check your answers.
@zaysiz3 жыл бұрын
@@NigelFrancis Thank you for your answer. MM graph looks normal. If I neglect some reactions with low substrate concentration, become LB plot equation to y=ax+b. Should I neglect them for y=ax+b equation? I learned on the internet how to calculate km vmax by Eadie and tried Eadie Hofstee plot. Equation looks normal but I am not sure of the accuracy. I wonder before everything, Do you say that I can not calculate Km and Vmax by y=ax-b equation. I should change substrate concentrations and have to fix the equation for y=ax+b, haven't I?
@NigelFrancis3 жыл бұрын
@@zaysiz You cannot calculate Vmax from a negative y-intercept as the intercept point is 1/Vmax. I suspect that there is either an error in the experimental procedure or that the concentration of the substrate is incorrect and is causing errors that are magnified at the lower concentrations due to the bias in the LB plot.
@zaysiz3 жыл бұрын
@@NigelFrancis Thank you so much for your interest.
@chawanangwachiponyirenda2808 Жыл бұрын
How did you find the gradient on the equation without using excel please help
@NigelFrancis Жыл бұрын
The gradient ‘m’ can be calculated using the equation (y2 - y1)/(x2 - x1). I hope that answers your question?
@chawanangwachiponyirenda2808 Жыл бұрын
@@NigelFrancis thank you so much
@lukefuller80682 жыл бұрын
why is the Km higher than Vmax, I thought km was 1/2 max?
@NigelFrancis2 жыл бұрын
Vmax and Km have different units, Vmax is normally expressed as a unit of concentration/a unit of time (e.g.micromoles/second). Km on the other hand is expressed as a unit of concentration (e.g. micromoles). The Michaelis-Menten plot allows you to approximate Km from the 1/2 Vmax value e.g. if Vmax was 100 then the concentration that would be equivalent to Km would be that where Vmax is equal to 50. It does not mean that Km is exactly equal to the value of 1/2 Vmax. Hope that helps?