Yes, you will want to bypass all water treatment. You should start running the water outdoors first before running into your home so only minimal sediment should enter your home plumbing. Please see accompanied information sheet for additional instructions on this process www.watersystemscouncil.org/download/wellcare_information_sheets/well_water_testing_&_treatment_information_sheets/Disinfecting-Your-Well.pdf. Please contact our wellcare Hotline with any follow up questions at wellcarehotline.org or info@wellcarehotline.org. Thank you for contacting us!