Microbiome Discovery 7: Alpha Diversity

  Рет қаралды 56,431

Dan Knights

Dan Knights

Күн бұрын

Пікірлер: 26
@shivaa.aghdam7097
@shivaa.aghdam7097 3 жыл бұрын
I really appreciate your tutorials. Easy to understand for beginners, thank you.
@gembarry8280
@gembarry8280 6 жыл бұрын
I really appreciate your tutorials, nicely explained
@cindywang8852
@cindywang8852 5 жыл бұрын
Very clear and concise tutorial. Easy to understand for beginners like me. Thank you!
@CLSooth
@CLSooth 7 жыл бұрын
Thanks for this awesome video series! :)
@paulMcGlothin
@paulMcGlothin 5 жыл бұрын
Terrific video -- very instructive!
@guspapini
@guspapini 2 жыл бұрын
Really good explanations Dan. Keep it up with the good job.
@adeelabbasi7375
@adeelabbasi7375 3 ай бұрын
great videoo... very simple and explainatory
@Thinker-gd8ck
@Thinker-gd8ck 2 жыл бұрын
Thank you for your sharing, it is easy to understand.
@mahdighanbari2384
@mahdighanbari2384 7 жыл бұрын
Thank you for this informative series of presentation. Regarding the alpha diversity, do we need to include the normalized table as input?
@AmirHTofangchi
@AmirHTofangchi 10 ай бұрын
Awesome video👍🏻 Thank you!
@AndrePegoraro2
@AndrePegoraro2 4 жыл бұрын
Very nice! Thank you
@monzurmorshed.
@monzurmorshed. 3 жыл бұрын
Thank you for the lecture.
@holozoan
@holozoan Жыл бұрын
Very clear, thank you!
@nicolasortiz6523
@nicolasortiz6523 3 жыл бұрын
Thank you! Great lecture
@hanhnguyen84
@hanhnguyen84 7 жыл бұрын
Hi Dr. Knight, I am wondering instead of doing relatively abundance, could we normalize all the reads to the same sequence count by divide each sequence count to certain factor (for example, sample 1 got 30000 reads, sample 2 have 60000 sample 3 have 90000 then we divide the first read by 1, second by 2 and third by 3 and end up with each of them have 30000 reads) and from there we can consider the abundance we have as absolute abundance for statistic test. Thank you so much!
@nelsoncreemov
@nelsoncreemov Жыл бұрын
Thank you!
@benerentraut631
@benerentraut631 5 жыл бұрын
Why does nobody ever use the variance of the Chao 1 estimator?
@AqleemAbbas
@AqleemAbbas 5 жыл бұрын
Any example: I have two different soil samples. so what would be the alpha and beta diversity in this case.
@adihirsh2410
@adihirsh2410 4 жыл бұрын
Can you explain what is the diffrent between OTUs and Observed OTUs?
@srijanamukhia1751
@srijanamukhia1751 2 жыл бұрын
Nice tutorial, thank you
@learnmedicalhealthsciences5618
@learnmedicalhealthsciences5618 Жыл бұрын
👍
@marcdittmann95
@marcdittmann95 4 жыл бұрын
I did not really get how changes in composition happen without changes in diversity..? Can someone help?
@AqleemAbbas
@AqleemAbbas 5 жыл бұрын
What is the meaning of percentages in each coordiante? i.e. PC1 13 % and PC 2 4.4 %, How can we define this percentages, when we will have to write a research paper?
@mohamedrefaat197
@mohamedrefaat197 5 жыл бұрын
As far as I know, they represent the percentage of the variance explained by each principal component.
@AqleemAbbas
@AqleemAbbas 5 жыл бұрын
@@mohamedrefaat197 Yeh I also know but if the percentage reduce or very low in coordinates what does it indicates
@Caroline-vy1co
@Caroline-vy1co 2 жыл бұрын
Thank you!
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