NGS Data Analysis 101: RNA-Seq, WGS, and more - #ResearchersAtWork Webinar Series

  Рет қаралды 79,152

Applied Biological Materials - abm

4 жыл бұрын

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Learn more about abm's NGS services at www.abmgood.com/Next-Generation-Sequencing-Service.html or email NGS@abmgood.com to get in touch with our dedicated bioinformatics team.
Today's webinar agenda:
1. Brief Review of Next Generation Sequencing
2. Understanding NGS Data Outputs
3. Whole Genome Sequencing Data Analysis
4. Working with RNA-Seq Data
5. Wrap Up + Q&A
---
New to bioinformatics analysis for NGS data and want to learn more?
One of the benefits of Next Generation Sequencing is the large amount of data that can be generated for each sample and each project. Often, though, it can be challenging to make sense of your data and perform meaningful analysis to plan the next stages of your research.
For all types of NGS, the sequencing is often only the beginning of the project. Once you have this data, you may want to look at small insertions or deletions in your samples (Whole Genome Sequencing), learn more about differentially-expressed genes after treating your cells with a specific drug (RNA-Seq), or determining what prokaryotes compose the microbial community that is present in a soil or water sample (16S rDNA Metagenomics).
Sorting through large data sets and interpreting your results can often be a bit intimidating.
In this webinar, we'll discuss data analysis for NGS data, including running through examples for different types of analysis you may want to do for your project!
You'll learn about:
•An introduction into processing NGS data
•How that data can be used for different types of analysis, including:
- Variant Calling
- Differential Gene Expression
- and more
•Troubleshooting common issues that can arise during analysis
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Links to additional NGS resources:
- Knowledge Base and Videos: www.abmgood.com/marketing/knowledge_base.php
- Next Generation Sequencing Blog Posts: info.abmgood.com/blog/topic/next-generation-sequencing
- abm's Next Generation Sequencing Services: www.abmgood.com/Next-Generation-Sequencing-Service.html
Connect with us on our social media pages to stay up to date with the latest scientific discoveries:
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Пікірлер: 40
@arpitpanda390
@arpitpanda390 4 жыл бұрын
I work as a bioinformatician and take a lot of these things for granted. Thank you for explaining this really well! It was still very instructive going through this video and filling the gaps in my knowledge.
@abmgood
@abmgood 3 жыл бұрын
Hi Arpit, thank you for watching our webinar and leaving such a nice comment! Please let us know if you have any questions and we will try our best to assist you!
@dkvision7473
@dkvision7473 2 жыл бұрын
@@abmgood you happy 😊 I hope 🤞 can come bye
@mrudullalitya7380
@mrudullalitya7380 Жыл бұрын
Hi Arpit can i get ur mail id ?
@Its_InduB
@Its_InduB 2 жыл бұрын
Hey can you please provide any video related to CRISPR data analysis?? After getting desired gRNA and target sequence
@mochipham5943
@mochipham5943 2 жыл бұрын
Very helpful, this video guide me how to design experiments. But I've haven't understood about the Variant calling Analysis, please notice me if you post something related to this topic. Thank you very much.
@ranjithkumar8063
@ranjithkumar8063 Жыл бұрын
That's amazing. Do you guys have any tutorials or one to one hand on training for beginners?
@kiplagatenai
@kiplagatenai 3 жыл бұрын
Wonderful. Really informative, thanks for this.
@abmgood
@abmgood 3 жыл бұрын
Great to hear that you found the video helpful, Cleophas! :)
@shanefitzgerald9339
@shanefitzgerald9339 4 жыл бұрын
Thank you for the great videos!
@abmgood
@abmgood 4 жыл бұрын
Thanks for watching!
@esmabilen4721
@esmabilen4721 Жыл бұрын
Thank you for video. That is so informative and understandable
@abmgood
@abmgood Жыл бұрын
Glad you enjoyed it!
@rosaloffredo4929
@rosaloffredo4929 3 жыл бұрын
Very informative video for who, as me, is approaching to NGS world.
@abmgood
@abmgood 3 жыл бұрын
Glad you found the video helpful! ;)
@dkvision7473
@dkvision7473 2 жыл бұрын
@@abmgood f
@HewanDemissie
@HewanDemissie 3 жыл бұрын
Thank you very much. Very imformative.
@abmgood
@abmgood 3 жыл бұрын
Thanks for watching! Glad it was helpful ;)
@Michael-il8ls
@Michael-il8ls Жыл бұрын
do they compare healthy cells vs cancer cells for the same organism?
@ralsg5409
@ralsg5409 3 жыл бұрын
Deseq2 needs raw counts, not normalised counts. Why are you suggesting to run Deseq2 after Stringtie normalisation? Thank your for the video
@abmgood
@abmgood 3 жыл бұрын
Hello there, You are correct that DESeq2 uses raw counts and not normalized counts, apologies for the confusion.
@k2btube
@k2btube 3 жыл бұрын
This is an excellent video !!!
@abmgood
@abmgood 3 жыл бұрын
Thanks for watching! :)
@kasthurirajendran6293
@kasthurirajendran6293 3 жыл бұрын
Thanks for the informative video.
@abmgood
@abmgood 3 жыл бұрын
You're very welcome! ;) Thanks for watching.
@johirislam8174
@johirislam8174 2 жыл бұрын
I want to analysis NGS data in linux. So how can i do that
@adarshraj.j1335
@adarshraj.j1335 3 жыл бұрын
can you also show us the command lines used for sequencing either in linux ???
@abmgood
@abmgood 3 жыл бұрын
Hello Adarsh, We will let our content production team know! Thanks so much for your suggestion :)
@alisaber502
@alisaber502 Жыл бұрын
Hi there, Its been a while that I am using this book to learn how to analyze Genome data: "Computational Exome and genome Analysis" But I need a faster way to watch webinars or videos and learn how to analyze genome instead of reading this thick book! Do you have any suggestions to me? Any channels or websites?
@ruzmayuddinmamat8438
@ruzmayuddinmamat8438 Жыл бұрын
Hi Sir, do you have a pdf copy of this book? Kindly can you share this book with me?
@gautamnisha7193
@gautamnisha7193 3 жыл бұрын
Thanks for the video
@abmgood
@abmgood 3 жыл бұрын
Thanks for watching! ;)
@JyotiKumari-fu6js
@JyotiKumari-fu6js 2 жыл бұрын
Very informative 😊
@abmgood
@abmgood 2 жыл бұрын
Glad it was helpful! ;)
@masumasultana1236
@masumasultana1236 4 жыл бұрын
17 min to 25 min RNASeq
@abmgood
@abmgood 4 жыл бұрын
Hi Masuma, did you have a question about the content?
@anuragbari9535
@anuragbari9535 3 жыл бұрын
Is G and JBrowse a paid software ???
@mrmeach1967
@mrmeach1967 3 жыл бұрын
12:58 de novo assembly
@ekapurwanti2387
@ekapurwanti2387 3 жыл бұрын
Assalamualaikum mohon ijin bergabung kami Jalasenastri Ny.eka agus riyanto Ranting G cabang 3 KP 2 Surabaya.Terimakasih🙏