Where is Anatomy Encoded in Living Systems? | Michael Levin

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SEMF

SEMF

Күн бұрын

Extract from "Cell Intelligence in Physiological & Morphological Spaces", kindly contributed by Michael Levin in SEMF's 2022 Spacious Spatiality.
Full talk: • Michael Levin | Cell I...
MICHAEL LEVIN
Department of Biology, Tufts University: as.tufts.edu/biology
Tufts University profile: ase.tufts.edu/biology/labs/le...
Wyss Institute profile: wyss.harvard.edu/team/associa...
Wikipedia: en.wikipedia.org/wiki/Michael...)
Google Scholar: scholar.google.com/citations?...
Twitter: / drmichaellevin
LinkedIn: / michael-levin-b0983a6
SEMF NETWORKS
Website: semf.org.es
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Пікірлер: 556
@FlatEarthMath
@FlatEarthMath Жыл бұрын
This is such a fascinating subject. I've often pondered this little thought experiment. _"Describe _*_exactly_*_ the shape and size of a human femur. Your instructions can be as long as you like, but you may only use four letters. Go!"_
@SEMF
@SEMF Жыл бұрын
Great thought experiment!
@richard_d_bird
@richard_d_bird Жыл бұрын
I've thought about this before, and based on my complete ignorance, i've generally come to assume that the information for animal morphology is "encoded" in the process of growth itself. that is, the individual cells of an animal are a bit like tiny little iterating math functions, passing their outputs back to themselves, or rather, to their descendants as they divide and reproduce. it's well known that relatively simple little math functions can be iterated, passing their outputs back into their inputs, to create very complicated patterns, the information for the patterns created isn't obviously encoded in the functions themselves, or in the data they pass back to themselves. the patterns emerge as the process is run, they are "encoded" in the process itself. i'm sure this is a lousy analogy, and a pretty picture created by simple math functions isn't really anything much like, say, a frog, but i think there's something similar going on with biological morphology all the same. and i doubt i'm the first one to think of that.
@SEMF
@SEMF Жыл бұрын
Those are very interesting thoughts. Thanks for the detailed comment!
@solemnwaltz
@solemnwaltz Жыл бұрын
That's pretty much what I assume too
@osaimola
@osaimola Жыл бұрын
Interesting thought indeed. How would this play out with mutation? If a mutation occurs in the early stages of growth, will it be able to derail the correct formation of the organism? Or is mutation only restricted to later stages and specific areas of the organism.
@WisdomThumbs
@WisdomThumbs Жыл бұрын
@@osaimola I know from my friends who took puberty blockers that “delaying” puberty turned out to be permanent. So after they quit the blockers, they were compelled to move on to HRT, otherwise they were stuck in teenage bodies with the bone and hormone problems of the elderly. And we can also see that a pituitary gland mutation tends to cause stunted growth or exaggerated growth, though it can be hard in those cases to be certain if the pituitary was the first and only cause.
@christerdehlin8866
@christerdehlin8866 Жыл бұрын
Yes, perhaps, but what makes the process stop at the right moment?
@Pinstripe6666
@Pinstripe6666 Жыл бұрын
This man has a nobel prize in his bags. It's only a matter of time.
@SEMF
@SEMF Жыл бұрын
Very likely the case!
@ChemEDan
@ChemEDan Жыл бұрын
Wow, this has to be one of the best videos on KZfaq.
@SEMF
@SEMF Жыл бұрын
Levin Lab's work really is amazing!
@VooDooTube...
@VooDooTube... Жыл бұрын
Future nobel prize winner.
@pyropulseIXXI
@pyropulseIXXI Жыл бұрын
for sure
@SEMF
@SEMF Жыл бұрын
Very likely indeed!
@philanthropicnightmare1206
@philanthropicnightmare1206 3 ай бұрын
110%
@anistissaoui
@anistissaoui 9 ай бұрын
I love to picture our cell structure as an orchestra or a choir, pretty much everyone in the orchestra knows what to sing and how to harmonize, they know their melodic role in the piece, and usually you get a group of players/singers play/sing same lines and some times harmonize basic to complex melodies that evoke different emotions in us listeners. If a player/singer falls out of time or skips some notes, the whole orchestra will lift them up and eventually they will know their place again and play their melody the one needs to be heard. So, the encoded anatomy is more like a song that's being sung by the whole community of the cells in our body, and once the song misses some notes the new born cells will jump in to fill their role and sing their life melody. Imagine an old folklore song that you recall but you don't really remember the whole lyric, if you try to sing it with friends that share the memory with you, as a group you will eventually sing the whole of it correctly.
@SEMF
@SEMF 9 ай бұрын
That's a beautiful elaboration!
@janemichael5740
@janemichael5740 Жыл бұрын
This talk described the threshold of science and magic
@SEMF
@SEMF Жыл бұрын
It really did!
@brusso456
@brusso456 Жыл бұрын
Look up, Rupert Sheldrake - Morphic Resonance and Morphic Fields
@xiaonanw6374
@xiaonanw6374 Жыл бұрын
@@SEMF "inclusion and diversity " wtf man
@generichuman_
@generichuman_ Жыл бұрын
@@xiaonanw6374 huh?
@xiaonanw6374
@xiaonanw6374 Жыл бұрын
@@generichuman_ their description in about the channel..
@mcferguson81
@mcferguson81 Жыл бұрын
Did he really make one of the best science lectures I’ve ever seen … And use Comic Sans font for his slide deck? 😂😂
@SEMF
@SEMF Жыл бұрын
Indeed that was the case! This may give a different status to the font from now on...
@pyropulseIXXI
@pyropulseIXXI Жыл бұрын
Pure genius; this is paradigm shifting stuff!
@SEMF
@SEMF Жыл бұрын
Most likely so!
@commanderthorkilj.amundsen3426
@commanderthorkilj.amundsen3426 Жыл бұрын
ML and similar researchers are, of course, building upon previous work, with immense collaboration and sharing occurring on a global basis, leading to the exponential increases in knowledge and astonishing technological development that we’re seeing. Meanwhile, during the quest to eradicate many diseases of humans, improve human lives, nonhuman life is being destroyed, the biosphere is being degraded, fished-out oceans polluted w/ plastic, resources depleted, and 1,000,000 new humans added q 4-5 days. So the exhaustion of the Earth’s resources by too many human parasites, the scary but inevitable military applications of AI, necessitated by an escalation in war and conflict over dwindling resources, and the unintended consequences of bio technological/genetic engineering will make Dr. Levin’s fine work superfluous, as catastrophes loom on the horizon.
@SEMF
@SEMF Жыл бұрын
@@commanderthorkilj.amundsen3426 This is an important notice!
@laurisafine7932
@laurisafine7932 Жыл бұрын
@@commanderthorkilj.amundsen3426 Blimey! Doomer, much?
@Quidisi
@Quidisi Жыл бұрын
Holy crap that was mind-blowing! Especially the "Picasso-Tadpole" 11:37
@SEMF
@SEMF Жыл бұрын
That was a really incredible example!
@canonaler
@canonaler Жыл бұрын
Michael is so brilliant, thank you for this !
@SEMF
@SEMF Жыл бұрын
It was a pleasure to host him at SEMF!
@tsbrownie
@tsbrownie Жыл бұрын
Fascinating talk ended before I was ready! As a software engineer I was trying to imagine what kind of program could produce a "self-healing" result from simple inputs that update along the way. Off the top of my head, it looks like a main routine that spawns and passes most functions to subroutines that deal with the finer and finer details (but that stay in touch with other routines above and below). If I were younger....
@hindenberg25557
@hindenberg25557 Жыл бұрын
If you want to hear more from him, he had a great interview on Lex Fridman's podcast
@jonathansmith2323
@jonathansmith2323 Жыл бұрын
this is an extract from the longer kzfaq.info/get/bejne/oLKZe69117W4h2w.html
@nickjunes
@nickjunes Жыл бұрын
It's so crazy this is the only man talking about this stuff.
@SEMF
@SEMF Жыл бұрын
He is representative of the work at his lab and by his collaborators, perhaps he is the most visible but not the only one?
@nickjunes
@nickjunes Жыл бұрын
@@SEMF Yeah I'm sure that in the community there are more people, but in mainstream I think this is getting nearly zero attention.
@bobaldo2339
@bobaldo2339 Жыл бұрын
This "goal directed behavior" is so surprising to us because it seems to fly in the face of the unconsciously assumed reductionism that permeates our culture. The whole, in many cases, may not only be "greater than the sum of its parts", but also more fundamental.
@SEMF
@SEMF Жыл бұрын
This is a very interesting observation and one that will be addressed in future SEMF events and discussions.
@metacortexvortex2131
@metacortexvortex2131 Жыл бұрын
I always wondered how your cells know how to grow and correct errors in 3d space like how do they define a boundary in space so they don't just keep growing. That made me think of cancerous tumors and how they seem to have lost the ability to stay within their spatial domain as they grow out of control.
@cyberbiosecurity
@cyberbiosecurity Жыл бұрын
they lose growth regulating genes due to dna damage. by 'default' singular cells emerged to just multiply successfully as soon as possible. then regulation of this process evolves to be more adaptive and survive as a colony [see volvex]. these growth-suppression genes get slammed out of the chain and we get faster multiplication. hope your T-killers detect this asap.
@TristanCleveland
@TristanCleveland Жыл бұрын
The book Life Becoming (I think it's called) lays out a bunch of mechanisms. Stuff like: when the density of certain signalling cells get too low, or weird algorithms where the rate by which the cell creates or destroys certain rigid structures equalizes. It's analogous to how hair reaches an equilibrium point based on how quickly it falls out and how quickly it grows. I only vaguely remember, but it's cool.
@SEMF
@SEMF Жыл бұрын
Michael's research is indeed a great advance in this direction!
@thomashenry4798
@thomashenry4798 Жыл бұрын
I would suspect that cells constantly monitor their environment. So cells that are on the edge of an embryo, the surface cells, are constantly broadcasting surface signalers. Cells that are next to them broadcast a unique signaler and so on and so forth. By monitoring the average gradient of signaling proteins a cell can get a rough idea of where it is in the embryo as it develops. Then based on their locations cells then attempt to begin to differentiate. My guess is that they start putting out signalers that recruit neighboring cells that recruit neighboring cells until the signal strength reaches a critical threshold at which point an election process begins amongst them to further differentiate, activating some parts of the genome and shutting down others. So say you have an embryonic liver. One cell decides its going to be a liver cell and it tells the surrounding cells to also become liver cells. If those cells are undifferentiated they recruit and turn off their ability to be anything and instead become liver cells, signaling what they are doing all the while. When the signal reaches a strength threshold the cells stop recruiting and start dividing. Cells that are on the boundary layer know this because they dont have liver cells on all sides, only on one side, so signaling proteins would be roughly half of what a cell inside the group might experience. This allows the liver cells to output signaling proteins "Hey I am on the boundary layer!" to other cells. Then once the boundary is established you can link all the boundary cells together with mechanical linkages and monitor those linkages for damage. A loss of a connection could change how the tensile strength of the boundary cells gets interpreted. So if you have mechanical changes, plus damage signals in the water, the cells know to interpret it as damage and so begin the healing process. Whereas if you just have flexing alone, then that triggers nothing. Basically an AND gate if I were to convert it into my field (I work in IT. So feel free to call my meanderings a load of baloney!) I think how the system works is that each cell, having the same genome as every other cell, uses hormones and signals to know which bits to turn on and which bits to turn off. This defines which proteins and signals and chemicals a cell produces vs which ones it doesnt produce, and the presence of these proteins are what chemically and mechanically define how the cells interact with each other. With billions of chemical pathways inside a cell acting almost like very very very tiny logic gates, the cell is able to make decisions based off of its immediate surroundings. Taken in aggregate all these chemical logic circuits combine to produce emergent behavior. The reason that say, Picasso always produces a frog... You have cells that elect to be the front of the organism and cells that elect to be the middle and cells that elect to be the back end. Then you have cells that are eyes and they are basically telling all their neighbors they are eye cells. Except those cells chemically do not respond to eye cell signals. So instead the eye cells look for the signals that indicate front vs back, and begin to migrate to the front. There is probably a mechanism to allow them to migrate around. As the cells migrate they detect 'Face' signals which tells them its going in the right direction. Eventually they find the cells they are supposed to be next to and stop there. They overcorrect because as this is a chemical biological process, they can get too strong a signal and move too enthusiastically, whereupon they encounter boundary cells where they arent supposed to and move away from that boundary layer signal. Because there are TRILLIONS of possible protein combinations, you can theoretically have as many signals as you need to set off as many chemical pathways as you need for these logic circuits that then chemically set off yet more pathways that allow the cell to move around mechanically. Its why you first have a mass of undifferentiated cells in a ball because thats the easiest shape that has a defined inside and outside. At least that is my layperson thinking. No idea how close to the truth I actually got.
@SEMF
@SEMF Жыл бұрын
@@thomashenry4798 Thank you so much for the very detailed comment! I suggest you join our online community to further share your thoughts with SEMF members: semf.org.es/participate/join.html
@penguinista
@penguinista Жыл бұрын
This is such a powerful way to think about biology. And the examples are excellent. The nephron example at 8:45 clearly shows that there is a system with memory of the setpoint structure and access to multiple mechanisms to effect the changes required to become that shape. It also shows that the system is getting feedback from the growing structure. It must know when it is working with cells large enough that only one cell is required to make a tube with sufficient size lumen. They are such big ideas that people brains literally balk when I try and tell them about it. I hope short videos will make it easier for people to be able to digest the new concepts.
@SEMF
@SEMF Жыл бұрын
Thank you very much for the comment! We are also hoping shorter videos will be useful!
@javiermachin1
@javiermachin1 Жыл бұрын
“How could we have a navigation system that can have goals in anatomical space?” Living systems are wonderful. Very nice talk. Thanks.
@SEMF
@SEMF Жыл бұрын
Glad to see you enjoyed our content!
@xiaonanw6374
@xiaonanw6374 Жыл бұрын
@@SEMF how can one claim science but actually be a proponent of the opposite of science ??? Please tell us
@SEMF
@SEMF Жыл бұрын
@@xiaonanw6374 What do you mean?
@xiaonanw6374
@xiaonanw6374 Жыл бұрын
@@SEMF I appreciate your reply and your content to be clear continue the content... Your content is a meeting place of different ideas , all with the focus of cross pollination ... allowing the absorbing of and discussion of and thus development of deeper understanding for everyone involved ... truly EPIC and heart warming In your about section you boil that down to the "inclusion of diverse viewpoints" which has come to represent of those groups and people who use such language as actually meaning we value all viewpoints but only the "valid ones" and that validity is not created by nor supported by the diverse discussion but rather limits it. As I feel your truly about multi angled and multi disciplinary discussion then I feel you need to be more clear about that in your language... unless you are trying to capitulate to that "jargon" which unfortunately signals fundamental corruption of your stated goals (ideals) In any case. Take it as you will
@SEMF
@SEMF Жыл бұрын
@@xiaonanw6374 Thanks for the kind words!
@gabrieldaley5881
@gabrieldaley5881 Жыл бұрын
This channel and this video in particular are excellent finds. Thanks!
@SEMF
@SEMF Жыл бұрын
Thank you very much for your kind comment. We feel privileged to be able to bring this cutting-edge research to a large audience.
@philippdeschain2124
@philippdeschain2124 Жыл бұрын
Glad to have stumbled upon this channel, it is of spectacular quality.
@SEMF
@SEMF Жыл бұрын
Thank you so much for your interest! We are glad you are enjoying our content. Please visit our website for more information on the society behind this channel: semf.org.es/
@danielvarga_p
@danielvarga_p Жыл бұрын
Thank you guys, keep up the good work!
@SEMF
@SEMF Жыл бұрын
Thank you, it is our pleasure!
@bradsillasen1972
@bradsillasen1972 Жыл бұрын
Mind blowing! Excellent presentation. Thanks.
@SEMF
@SEMF Жыл бұрын
We thought so too! Thanks for your comment!
@Budgiesmudgie
@Budgiesmudgie Жыл бұрын
Thank you for putting this on KZfaq
@longcastle4863
@longcastle4863 Жыл бұрын
Fascinating research. What a great project to be part of.
@SEMF
@SEMF Жыл бұрын
It truly is fascinating!
@semaifirtes
@semaifirtes Жыл бұрын
This is a much needed video. I want to hear much more about this question. I'd like to understand as a lay person, and not a genetics and development scientist
@SEMF
@SEMF Жыл бұрын
Look forward to future SEMF events, we will be having many opportunities to learn from the basics. semf.org.es/participate/join.html
@Solar_Max
@Solar_Max Жыл бұрын
He ends with the question. I am no further ahead than at the beginning.
@SEMF
@SEMF Жыл бұрын
This is the beginning of a scientific research field, it is natural to still be humble and stay sceptical.
@Ron-rk6iz
@Ron-rk6iz 11 ай бұрын
It is Memory, which is present all over your body, not only in the Brain, the rest is done by food intake. If you eat a piece of bread it becomes you, if another person takes a bite from that bread it becomes his body with all features according to the memory collected.
@ZapataCarratala
@ZapataCarratala 11 ай бұрын
That's a pretty accurate short account of it!
@dumyjobby
@dumyjobby Жыл бұрын
this is wonderful.
@SEMF
@SEMF Жыл бұрын
We are glad you enjoy our content!
@MikeKleinsteuber
@MikeKleinsteuber Жыл бұрын
This is a really interesting question extremely well presented
@SEMF
@SEMF Жыл бұрын
We thought so too. Michael is a very clear speaker!
@LuigiSimoncini
@LuigiSimoncini Жыл бұрын
thank you algo for bringing me this amazing stuff!
@SEMF
@SEMF Жыл бұрын
We are very happy the algorithm is bringing this to the fore!
@realGBx64
@realGBx64 Жыл бұрын
Wow, based on the channel logo I was not expecting a proper science lecture. Well done!
@SEMF
@SEMF Жыл бұрын
Thanks for the feedback! If we may ask, what about the logo made you think that the content wouldn't be a "proper science lecture".
@realGBx64
@realGBx64 Жыл бұрын
@@SEMF looks like a spiritual tree of life logo of some cult to me.
@SEMF
@SEMF Жыл бұрын
@@realGBx64 Interesting! Well thanks for the feedback, it is always useful to gather impressions. The tree-like shape is a remnant of our former logo that had the "Tree of Knowledge/Science" as a centrepiece. The current design is intended to evoke dendrites/neurons, particle traces, etc. If you want to learn more about the society behind this channel you can visit our website: semf.org.es/mission/
@user-pq3uz2zb9i
@user-pq3uz2zb9i 9 ай бұрын
Amazing!
@arturwronski8652
@arturwronski8652 Жыл бұрын
Great insight to understand life! But sill the question “where it is encoded?” is unanswered. I believe that species pass through generations not only physical characters but also experiences. I mean not only instincts, but also complex behaviour patterns (e.g. cuckoo chick ejects eggs out of the nest). The question is relevant not only to morphology, so what is the answer? Kind of The Little Prince’s magic box answer: somewhere within the very first cell AND/OR somewhere outside the cell. The part “outside the cell” cannot be neglected, because “the law of physics,” at least at atom level (and sub-atom) provide infrastructure life is based on. Can we reject the idea of Cloud storage? Or, may be single cell encodes much more than we thought
@aeolianharp1363
@aeolianharp1363 9 ай бұрын
Fascinating new perspectvive
@SEMF
@SEMF 9 ай бұрын
It really is!
@eaudesolero5631
@eaudesolero5631 Жыл бұрын
So after watching this video I read through a lot of the comments. I then went and watched some more in-depth stuff of his at greater length. My background is computers and physics and I have dabbled in cell and molecular biology and Neuroscience. I cannot help but think about Quantum superposition and entanglement. It has been demonstrated that there are quantum effects going on in the brains of mammals. It must also be true for the way that the protein structures fold. It would answer the question as to how they do it so quickly. Add to that the holographic theory of memory. And how much information is stored in a hologram. And the astronomical number of permutations that are present to encode information in DNA. I would not be surprised at all if the electrical patterns that we are seeing or encoding the shape information in a manner of Quantum superposition
@SEMF
@SEMF Жыл бұрын
There is a real possibility that quantum entanglement is involved in the process. Great comment!
@lotfibouhedjeur
@lotfibouhedjeur Жыл бұрын
This was fascinating.
@SEMF
@SEMF Жыл бұрын
Indeed it was! It was a privilege to host Michael at our conference.
@dimomarkov8937
@dimomarkov8937 Жыл бұрын
Your channel, and this video in particular caught my attention due to a completely different reasons - i was planning on making a tool for generating beings for a video game, that have anatomy and can maintain homeostasis of some kind. The things you said gave me a lot of ideas. I doubt it will be useful for advanced academic purposes, but i bet it's going to be a fun little toy, that might or might not give some intuition about further stuff. I reckon feedback loops play a huge role - a homeostasis can be seen as a chaos control mechanism selectively developed by nature, to maintain optimal parameters of a chaotic system throughout its lifetime. Chaos control is currently an emergent tech that has many useful practial AI implementations, and in some sense can reverse-engineer (approximate) some natural mechanisms. So, designing and compiling a living system would inevitably be the designing and compiling a system of feedback mechanisms for chaos control.
@SEMF
@SEMF Жыл бұрын
That sounds fascinating! We invite you to share such projects with our community: semf.org.es/participate/join.html
@ronmullick253
@ronmullick253 9 ай бұрын
Wow.Mind blowing.
@SEMF
@SEMF 9 ай бұрын
It really is!
@markharris1223
@markharris1223 Жыл бұрын
Splendid. Thank you..
@SEMF
@SEMF Жыл бұрын
Thanks for your comment!
@aaronknight7129
@aaronknight7129 Жыл бұрын
I wish I could participate. This is so fascinating.
@SEMF
@SEMF Жыл бұрын
Thanks for your interest! You can participate in the SEMF community by joining our network (free) following this link: semf.org.es/participate/join.html You will get access to our community forums, mailing lists and early announcements about future events for registration.
@andrewsheehy2441
@andrewsheehy2441 Жыл бұрын
Just want to say how wonderful it is to have credentialed scientist asking such a question. If we assume that information is encoded at the level of base pairs then the total amount of information that can be represented by a single molecule of human DNA is about 1.5GB - so not very much at all. If you were to model the human body down to the level of the individual cells (so not down to protein level) and tried to do that in a 3D modelling software like Blender then you'd need literally TB of data. So Mr. Levin right to ask how the 'missing' information is encoded. I think answering this question will open a door to a new panaroma for biology, and probably physics as well. Bravo!
@SEMF
@SEMF Жыл бұрын
That's a very relevant observation!
@Ikbeneengeit
@Ikbeneengeit Жыл бұрын
How then??! Tell us please!
@lavapanther
@lavapanther Жыл бұрын
Wonderful.
@SEMF
@SEMF Жыл бұрын
Thanks!
@SirCharles12357
@SirCharles12357 Жыл бұрын
I've been wondering about this for years this for years. Where is the blueprint? How do cells know where they are at in the tissue/organ/organ system/creature? How do they know when to divide or stop dividing? This is exciting stuff!!
@SEMF
@SEMF Жыл бұрын
This is super exciting indeed!
@osaimola
@osaimola Жыл бұрын
I recall watching a channel abiut single cell organisms and sometimes, and not nearly rarely, you see something that makes you think these things are intelligent & perfectly capable of some sort of reasoning (at least on some level)
@SEMF
@SEMF Жыл бұрын
@@osaimola Interesting!
@johnk6757
@johnk6757 Жыл бұрын
They don't know, there is no global/top down organization. Local rules evolve into equilibrium
@SEMF
@SEMF Жыл бұрын
@@johnk6757 Local rules evolving into equilibrium is indeed a very important abstraction to model the kind of phenomena Michael Levin studies.
@moderncontemplative
@moderncontemplative Жыл бұрын
This is epic! 👏🏾
@SEMF
@SEMF Жыл бұрын
Indeed it is!
@JonathanOelkers
@JonathanOelkers Жыл бұрын
Wow, top notch. It’s cool to see someone talk with specific knowledge about computer science and biology. It seems like the video ended without the question really being answered, or perhaps I just struggled to understand it. Somehow the tissues seem to ‘know’ what morphology they are meant to become, even if they need to take a different approach to getting there. Do you have a mechanism in mind to explain this?
@sillysad3198
@sillysad3198 Жыл бұрын
i think we must ask the question WHAT is encoded before "how" a blueprint encodes a shape and produces identical bolts and nuts. whereas frogs are all different, different IN SHAPE, yet they are all "similar" what IS this "similarity"? let alone Trees -- unique as effing fingerprints! the idea with geometrical space distortion is very misleading, i'd start from the CONNECTIVITY, certanly a connectivity "scheme" of a body must be much more invariant than the shape.
@MatthijsvanDuin
@MatthijsvanDuin Жыл бұрын
This video is just a small extract from the full talk, see video description
@Will-kt5jk
@Will-kt5jk Жыл бұрын
I liked the talk, but rather than suggesting routes of future research, it was describing why the question is a question to begin with & that it is yet to be explained. To be fair it does end by suggesting it’s unlikely purely emergent, but (based on the title) I was expecting some potential explanations of how it is encoded & more about ongoing research into those explanations.
@SEMF
@SEMF Жыл бұрын
That's a fair description. Michaels work is amazing and very promising but still early stages. We look forward to inviting him and his collaborators again!
@eloycolombo7125
@eloycolombo7125 10 ай бұрын
We need to learn how to talk to cells, proteins to convince them to do what we want.
@SEMF
@SEMF 10 ай бұрын
That's the idea!
@roger_isaksson
@roger_isaksson Жыл бұрын
14:58 The “smell” perhaps? A sensitive enough instrument likely could pick up how a certain “shape” “smells” from the metabolism of growing tissue which would correspond to the actual value in feedback control. After all, we’re a collection of cooperating cells and not cells that are programmed to grow into a certain shape. The macro shape of this collection of cells merely happens to be evolutionary advantageous as a configuration.
@SEMF
@SEMF Жыл бұрын
That's a very interesting suggestion!
@prschuster
@prschuster Жыл бұрын
There must be some incredible interaction and communication between cells and their molecular signals.
@SEMF
@SEMF Жыл бұрын
That's right!
@edthoreum7625
@edthoreum7625 Жыл бұрын
5:00 morphOspace
@rb8049
@rb8049 Жыл бұрын
Wow! My preconceptions are blown.
@SEMF
@SEMF Жыл бұрын
That's a great sign!
@rogerjohnson2562
@rogerjohnson2562 15 күн бұрын
Shape and function is information; where is the information stored? The question perhaps is how can proteins (made from the nucleus) effect the electromagnetic signals that direct shape and function? Also, what feedback mechanism informs the nucleus to shift protein generation.
@SEMF
@SEMF 15 күн бұрын
Great question!
@glenliesegang233
@glenliesegang233 9 ай бұрын
What makes living systems different from nonliving is simple: Order. The degree order imposed on matter and the flow of energy through it is specified by digitally encoded symbolic data, AND an operating system of immense complexity which regulates the production of each nanomachine and the regulation of each metabolic and structural component in patterns where groups of machine and processes unfold to produce a generative whole. A blueprint may be used to build a factory. But in living systems, instead, there is a written instruction manual made of words, interpreted by a cooperative robotic system which interacts with software which "understands" how to translate those words into structures and further instructions,, with regulations in timing. If the first group of builders builds the first room specified, copies his textts but highlights what the next builder should do and shouldn't do, and this process continues. What should make this extraordinary, actually a miracle, is these processes have built in error correcting systems which can accommodate changing environments. The individual words which are written for the builder to read may be "door" but the where and when of installation cannot be found in a simple sentence.
@SEMF
@SEMF 9 ай бұрын
Great summary!
@KorenyukOlexander
@KorenyukOlexander Жыл бұрын
Had a lot of thoughts about this topic. For sure, information component persist somewhere in encoded form
@SEMF
@SEMF Жыл бұрын
We are glad our highlight video got you thinking.
@aaronrodriguez4449
@aaronrodriguez4449 Жыл бұрын
First time I’ve ever wanted to hear the words “like for part 2”
@SEMF
@SEMF Жыл бұрын
We will invite Michael to future SEMF events! For now, you can watch the full talk here: kzfaq.info/get/bejne/oLKZe69117W4h2w.html
@GeoffryGifari
@GeoffryGifari Жыл бұрын
is studying the limit of regeneration useful to figure out where anatomical information is stored? how far can we slice an axolotl until it stops regenerating correctly?
@anthonyrepetto3474
@anthonyrepetto3474 Жыл бұрын
14:56 - "GOALS in anatomical space" I hear echoes of teleology... and I'm going there :)
@SEMF
@SEMF Жыл бұрын
Some causally justified teleology is probably the way to go!
@anthonyrepetto3474
@anthonyrepetto3474 Жыл бұрын
@@SEMF :) hehe - I wrote an essay, googleable, "Biological Teleology" as to my guess how cells can "choose what *will* be good for them."
@SEMF
@SEMF Жыл бұрын
@@anthonyrepetto3474 Interesting!
@p0indexter624
@p0indexter624 Жыл бұрын
good question
@SEMF
@SEMF Жыл бұрын
Michael outlines a very enticing answer!
@billmcdonald180
@billmcdonald180 9 ай бұрын
You say something that is 'goal' oriented rather than simply 'emergent' is uncomfortable for biologists, but I would argue it is indeed the opposite because as you've described, the reality is that these things ARE in fact goal oriented. So biologists should be very interested in this because it reflects what IS happening, rather than someone's preconceived ideology about how they think the world 'should' work.
@SEMF
@SEMF 9 ай бұрын
How are goals defined in nature?
@wombatmachine2.035
@wombatmachine2.035 Жыл бұрын
Please tell us about local growth factors for different facial features pls
@aj-uo3uh
@aj-uo3uh Жыл бұрын
I recently wondered about this so thanks youtube. Being a c++ coder I was wondering where the memory of the huge design of our body is situated. I googled a bit and I found that we know at least some genes that code for some structure. Good to know that overall its still a mystery. Being in addition a mathematician I know that a fractal can be defined by a simple formula. Together with this feedback idea we can at least get some intuition.
@SEMF
@SEMF Жыл бұрын
We are glad to provide the content to support such thoughts!
@kokopelli314
@kokopelli314 Жыл бұрын
Or some kind of recursive tensor with tightly distributed means.
@SEMF
@SEMF Жыл бұрын
@@kokopelli314 Could you expand what you mean by this? Sounds intriguing!
@kokopelli314
@kokopelli314 Жыл бұрын
@@SEMF so fractals exist in state space where consecutive points have indeterminate or chaotic vectors. That is the N+1 point is indeterminate given variation of initial conditions, but the attractor, or pattern remains fairly consistent within a set of mean values. These values could be represented by tensor, or sets of n vectors with probabilistic values affected by a recursive function. Like you indicated in the video. It might look like magic, but a recursive function, acting through state space would be like the complex plane.
@SEMF
@SEMF Жыл бұрын
@@kokopelli314 Thanks very much for the clarification!
@Embassy_of_Jupiter
@Embassy_of_Jupiter Жыл бұрын
So cells are like complex state machines, every cell senses it's own state and that of surrounding states and it tries to move to the end state (maybe along multiple states?) via some sort of minimization function, by signaling to itself and to the cells around them? I imagine it kind of how gradient descent moves along some manifold in high dimensional space and you minimize the distance to a point in state space. So is it in reality just a very complex fixed state machine or does it follow some minimization algorithm? I guess they both are the same in the end, but I hope you get my point. I imagine it a lot how machine learning works, mashing together vectors in some sense that doesn't seem to make sense initially, but it all works because the network has learned to interpret it. Like cells probably can't separate the signals from their neighboring cells and their second order, third order etc. neighbors, but because the states are so high dimensional, the mashed together states still encode that information. And I guess separating those signals isn't really necessary in the first place? But I think I'm simplifying this too much, there probably isn't one grand minimizer, but many different ones operating independently, that are again orchestrated through one or multiple state machines. Kind of like some parallel gradient descent working on different parts of the vector independently. And it's all happing using all kinds of different mechanisms from DNA, RNA, Proteins, hormones, methylation etc. working together in complicated and non-standard ways. But all the smallest scale components don't know their ought state, but it's encoded in their state machine. So the gradient descent analogy probably doesn't make sense. Or maybe there is a grand scale minimizer algorithm actually watching the states and orchestrating all the smaller state machines. Or is this again just some really complex "dumb" fixed state machine?
@SEMF
@SEMF Жыл бұрын
Many interesting ideas in this comment! Perhaps you would like to bring them to the SEMF internal community: semf.org.es/participate/join.html
@123100ozzy
@123100ozzy Жыл бұрын
Amazing
@SEMF
@SEMF Жыл бұрын
It really is!
@GeoffryGifari
@GeoffryGifari Жыл бұрын
what is it about amphibians that makes them regenerate more easily?
@Gamemake
@Gamemake 4 ай бұрын
Did you check if the wave function collapse algorithm is a good approximation for this? It seems like it can solve very similar problems by only looking at local state like cells can.
@SEMF
@SEMF 4 ай бұрын
This really was an amazing contribution. We are having a Levin-focused event in our community. You can join the live discussions on our community here: semf.org.es/participate/join.html
@jamespercy8506
@jamespercy8506 Жыл бұрын
the power of exaptation/re-purposing/comporting to novel contexts.
@SEMF
@SEMF Жыл бұрын
indeed!
@notlessgrossman163
@notlessgrossman163 Жыл бұрын
DNA might describe a cell but may also convey rules to each cell like cellular automata does for each pixel. Maybe there's biochemical markers and cellular sense making of its environment.
@SEMF
@SEMF Жыл бұрын
That's a very real possibility, thanks for the insightful comment!
@123TeeMee
@123TeeMee Жыл бұрын
There’s a game called cell lab where you make little multicellular organisms by defining a set of cell types, for each saying the angles of the descendants upon splitting, and what cell types the two descendants are. Combine this with the physics based precession of cells pushing and deforming each other and you arrive at some morphology. I’d say that encoding is not a great word for organisms that we know in real life, as code suggests it’s all layed out in readable form, when really it’s just a lot of evolutionary biases and constraints from physics, that is with the exception of the more organised aspects of dna, which aren’t the full picture.
@SEMF
@SEMF Жыл бұрын
That sounds super interesting! Why don't you share some links or info about that game with our community? You can join at no cost other than filling a quick form here: semf.org.es/participate/join.html
@LeeSandis
@LeeSandis Жыл бұрын
I have seen this talk pop up again and again on youtube over a long time. Any news on this?
@SEMF
@SEMF Жыл бұрын
This was an update in the general context of the concept of Spatiality in our conference. Arguably a summary of previous, previously known work, but very relevant to this concept of space and shape.
@BrainConduit123
@BrainConduit123 Жыл бұрын
Perhaps DNA contains the blueprint and specs for making whatever needs to made by simply storing pointers. The pointers point to a specific blueprint stored in some huge universal database from which the cells somehow retrieve the required information. For example, Pointer 6582240352982549 references the geometry of my big toe. Questions remain: Where exactly is the database, and how is the data retrieved? If you can answer either of these, I will gladly share my Nobel Prize with you.
@SEMF
@SEMF Жыл бұрын
That's essentially what Michael's research seems to point towards.
@jamesjones2212
@jamesjones2212 Жыл бұрын
The answer to this question can be found by deeply understanding the mechanism of self-similar structure transformation (Fractals). Just as the lungs were mapped by Mandelbrot himself so too can anatomical structures (Mandelbrot BB. The Fractal Geometry of Nature. W. H. Freeman & Co. Ltd; 1982.). Just as the Mandelbrot set forms 3d acorns, so to do organs and anatomy form finite shapes and they dont "stop" they continue but they iterate on themselves until no more energy is left in the system in which they are derived from. The key would be to use cross sections view (such as from fMRI etc) of development and with OpenCV to devise the baseline "fractal" that creates said shape. As to "where" this information is actually encoded, that answer becomes more clear when you start deconstructing all biology in terms of its baseline fractal. The encoding of this information is not present in the system directly, just as if we were to look at ChatGPT and view one of the transformations it wouldn't make sense as to how that singular transformation is able to perfectly structure sentences and the things it does. The information is encoded more in a gestalt way. (Fractals of Brain, Fractals of Mind: In Search of a Symmetry Bond (Advances in Consciousness Research, No 7)
@SEMF
@SEMF Жыл бұрын
Thanks for the insightful comment!
@roger_isaksson
@roger_isaksson Жыл бұрын
Well, if the geometry isn’t in the proteins, clearly it’s “downloaded” from the mother by some means of information transfer. It could be a simple hormonal sequencing information transfer.
@SEMF
@SEMF Жыл бұрын
The most likely mechanism, as Michael pointed out, is DNA and well-known genetic inheritance. But any other mechanisms, such as the ones you point out, are reasonable possibilities.
@javiercamposgomez1287
@javiercamposgomez1287 Жыл бұрын
Awesome!!! I always wondered about how shape and symmetry were “encoded”. Since I was younger I noticed that people who have extra fingers usually are not symmetrical and if symmetry was encoded in the DNA a mutation causing an extra finger should produce it on both hands, at least there were two sets of genes to control ontogenesis of each body side the body, which does not make much sense.
@SEMF
@SEMF Жыл бұрын
Precisely!
@aj-uo3uh
@aj-uo3uh Жыл бұрын
This is explained at 12:30 in the following kzfaq.info/get/bejne/iZlpaNSJm62aeIE.html
@SEMF
@SEMF Жыл бұрын
@@aj-uo3uh Thanks for the link!
@robertpalma7946
@robertpalma7946 9 ай бұрын
Very interesting concept! Would bone remodeling of a fracture site be an example of this process??
@SEMF
@SEMF 9 ай бұрын
It definitely looks like so!
@MNC2k
@MNC2k Жыл бұрын
so one starts out as a point in morphospace (I like that term) and gradually expands, stretches and shifts to occupy different regions. sort of like mthematical functions in a vector space? can we then work out the orthonormal equivalent in cell mrphology?
@MNC2k
@MNC2k Жыл бұрын
how many dimesnions can morphospace have as well?
@scenFor109
@scenFor109 Жыл бұрын
The Cellular Positioning System is probably set by holographic interference transmission and reception by cell wall antennae.
@guidopahlberg9413
@guidopahlberg9413 Жыл бұрын
The key is the distribution of regulatory substances in the body and their interaction with information/rules in the cell: if there is too much or too little of the substance, less or more will be produced. If you have rules for multiple substances, you get a stabile pattern (standing wave), like the stripes of a zebra, that define areas of the body. Think how this works on a scale with hundreds of regulators that create a complex pattern to define aspects of the morphology. If this system is perturbed, if will strive to get back into balance. If a new cell migrates into a tissue, its role is defined by the mix of regulators in its surroundings. The informational model for this would be a 3D pattern of Turing engines, interacting with each other locally, writing and reading streams of 'tape'. Each engine has hard-wired ROM data (DNA) as well as local RAM storage (RNA, methylizations). With the right kind of wiring and initial settings, the machines will interact to create an organism. If the settings are wrong, the organism will not converge and die off. Nature selects the working settings.
@SEMF
@SEMF Жыл бұрын
Very interesting thoughts! You may want to share them with our internal SEMF community: semf.org.es/participate/join.html
@guidopahlberg9413
@guidopahlberg9413 Жыл бұрын
@@SEMF Thanks for the invitation, I feel honored and will grasp the opportunity.
@guidopahlberg9413
@guidopahlberg9413 Жыл бұрын
@@SEMF Thanks, I feel honored by your invitation.
@fbkintanar
@fbkintanar 9 ай бұрын
Oh wow, this is very insightful. I am wondering how this take on closed loop pattern homeostasis, with a certain notion of "agency" and "intelligence", might be applicable to the patterns of (gross and fine) neuroanatomy and morphobehavioral outcomes in cognition. One system I have been thinking about for some time is the phonological component of linguistic competence. I am intrigued that all normal children will develop some kind of "morphospace" of phonemic distinctions (a system of "cognizable types"), incorporating the particular phonetic acoustic signals they happen to be exposed to in their household and community. What is surprising, and indicates that there are multiple paths to "the same" kind of outcome space is what happens to deaf children (or even hearing kids), especially those that are raised in a household or community where a lexically rich and fully grammatical sign language is used. (These are known as Deaf of Deaf kids, or in the case of hearing kids, Children of Deaf Adults or CODAs, and they grow up as highly fluent native signers.) They acquire an "emic system" that classifies "etic" gestures (distinguishing the phonemic-like level of cognizable types from the phonetic level of percept-level or subcognitive sensory signaling). My working hypothesis is that the similarity of behavioral outcomes (and potentially some of the encoding in brain morphology) can be understood in terms of the topological invariants on the geometric space of what seems to correspond to your notion of morphospace. Specifically, it seems like the etic space (of acoustic or gestural signals) undergoes some kind of (strong) deformation retract to a subspace of isomorphisms (identity functions or identifiability "functions" or perhaps homotopy types). There is a dramatic reduction in the degrees of freedom, and the phonemic (or gestural emic) types of the household-community are the outcome, different for each speech community or signing community but remarkably similar in structure when viewed as mathematical invariants. These ideas about phonology are about a relatively small subsystem of linguistic cognition, sort of higher percepts, that are closely tied to more elaborate linguistic systems like lexis and grammar constructions and semantics and pragmatics (and other areas of cognition like concept formation and recognition of intentional mental states in others). I have some ideas how a more general framework of cognizable types can accommodate some of the other subsystems of language, but phonology seems a practical place to start. This fits in with a broader framework of "information flow" influenced by the work of Barwise and Seligman (a 1997 book with that title), which may have a general enough mathematical model of information to accommodate the notions of biological information you are developing. I need to start looking into some of the papers you cite.
@SEMF
@SEMF 9 ай бұрын
Thank you for such a well-written and informative comment!
@fbkintanar
@fbkintanar 9 ай бұрын
@@SEMF You are welcome. I am trying to schedule binge-watching some of your content, hopefully I will have something more to say in the near future. Cheers!
@SEMF
@SEMF 9 ай бұрын
@@fbkintanar That's great to hear! If you want to contribute to the community, you are very welcome to join our mailing list and Discord server: semf.org.es/participate/join.html
@melblock1882
@melblock1882 Жыл бұрын
form, FIT, and function
@lake5044
@lake5044 9 ай бұрын
Do we have some clear experimental example of when the cells fail to form the typical structure they usually form, after some disturbance? If yes, then I think researchers should focus on that because it would allow us to pinpoint a necessary mechanism that didn't work. It's like how solving mazes is easier if you start from the end. Just observing that cells know how to rearrange themselves (on multiple levels and following multiple paths) simply looks like "magic" and doesn't really tell us how. Also, perhaps the complexity of how DNA translates to such diverse mechanisms can be better explored by automation. Imagine if we could automate making genetic (and epigenetic) changes and observing the effect on millions of test cell groups, it would become feasible then to launch a massive brute force search to pinpoint the genes necessary for this regeneration and be able to observe a huge number of variations and understand the effect of each change...
@SEMF
@SEMF 9 ай бұрын
Levin's work shows some direct experimental evidence. You can check other videos in our channel for it!
@user-nd7rg5er5g
@user-nd7rg5er5g Жыл бұрын
Perhaps the nephrons forming the lumen are paying attention to the surface tension across their cytoskeletons. If multiple cells could bend together and achieve their desired surface tension amount together, then great. If only one giant polyploid cell is available, then that's fine too.
@SEMF
@SEMF Жыл бұрын
A very real possibility!
@AwnSight
@AwnSight 9 ай бұрын
One thought i havent heard u touch on is how much can cells copy. Why do most embrios grow inside the mother. The cells might be using input from mother to know how to build
@SEMF
@SEMF 9 ай бұрын
That seems to be one of the most characteristic functions of cells indeed.
@anywallsocket
@anywallsocket 10 ай бұрын
I thought we already knew this. It’s not just life, but physics as well. Universal darwinism applies to all self-stabilizing systems ie any dissipative structure whatsoever - including physics itself. Clearly complexity and order supervenes on self-interaction at various levels of scale - it is not built into the initial conditions like your reversible, idealized, linear, physics would have you believe. Most phenomena are non-linear open dynamical systems, so if they are not autopoietic or at least self-stabilizing, they will dissipate due to the stochastic nature of reality, and therefore will not perpetuate long enough to converge onto self-replication and eventually become an ideal Quine.
@willowFFMPEG
@willowFFMPEG Жыл бұрын
I wonder if an individual cell can detect how many cells away is the nearest cell of a different tissue. like if a skin cell can detect how many skin cells are between it and the nearest subcutaneous fat cell, or if a liver cell can detect how many liver cells are between it and the nearest blood vessel cell, etc. Because if a cell *can* tell these things, then it seems to me like it would be a lot easier to figure out how anatomy emerges; each cell could roughly "triangulate" its position relative to other tissues in the body, and reproduce or die as needed to maintain an appropriate range of distances from the appropriate surrounding tissues. This is just a hunch but I'd be interested to hear what you think of it @SEMF
@drphosferrous
@drphosferrous Жыл бұрын
Til there are comicsans powerpoint presentations that i would pay to see.
@SEMF
@SEMF Жыл бұрын
Our thoughts exactly!
@drphosferrous
@drphosferrous Жыл бұрын
@@SEMF is it assumed that the undiscovered genetic data for morphology works in amphibian maturation just like it does for regular growth in other creatures?
@SEMF
@SEMF Жыл бұрын
@@drphosferrous It seems to be the case, yes.
@vesuvandoppelganger
@vesuvandoppelganger Жыл бұрын
Since very little of genomes is understood, how can someone claim that the information for body development is not contained in the genome?
@anonimperson7778
@anonimperson7778 Жыл бұрын
Low IQ.same genome different anatomy he explains how.
@dradvice9349
@dradvice9349 10 ай бұрын
I ve been in medicine field since many years ago, and I can call it after more than 33 years of practice , that God is real. !!! Congratulations for your incredible videos!!!!❤❤❤
@Quidisi
@Quidisi Жыл бұрын
Would love to know what Rupert Sheldrake would say to this. He has some pretty interesting theories about similar.
@jmarz2600
@jmarz2600 Жыл бұрын
This is Faraday and Maxwell level science. Their explorations in electromagnetism led to electric motors, telegraphs, phones, computers, etc. What will Levin's explorations into the bioelectric role in morphogenesis bring?
@SEMF
@SEMF Жыл бұрын
We hope to be there to attest future results!
@binra3788
@binra3788 Жыл бұрын
History reveals the weaponisation and marketisation of science by invested insiders seek prior advantage of insider knowledge, kept secret or surrounded by obfuscations. The Field approach is NOT a control model but a mindset of control seeks according to its own conditioned thinking, under the mask of serving humanity, for possession and control. Hence The Biotech revolution of augmented or captive human to such systems is close at hand. Living waters are structured by nanoscale quantum charge domains as a medium of translation of information unfolding from a whole. The pathological model rises from a sense of lack, exclusion, conflict, denial, set to defences that boost and reinforce the model as the basis for interpretation. Wholeness is a balancing alignment of a life as contextual expression. But All the king’s horses and all the king’s men cant see it as that predicates on a broken life that must be fixed.
@SEMF
@SEMF Жыл бұрын
@@binra3788 Interesting considerations!
@generichuman_
@generichuman_ Жыл бұрын
That lumen example is so good, that if I were a creationist, I would use it as one of my arguments. Luckily, I know better.
@SEMF
@SEMF Жыл бұрын
It is an amazing example indeed! Michael did say it was his favourite example to date.
@BenjaminHare
@BenjaminHare Жыл бұрын
The Platonic form strikes back.
@SEMF
@SEMF Жыл бұрын
The return of the Platonist when? ;)
@HyperFocusMarshmallow
@HyperFocusMarshmallow Жыл бұрын
Ok. Simple model problem. Suppose we want to generate a ball of cells with a certain number of cells as its radius or a certain distance as radius. What would be a simple way to achieve that. What would each cell have to measure, and what would be a mechanism to compare that to a number stored in for example the genome? A ball seemed like the simplest Morpheus space I could imagine, maybe there are simpler once.
@SEMF
@SEMF Жыл бұрын
Simpler problems like these are probably important to investigate. Perhaps you would like to share your thoughts within our community: semf.org.es/participate/join.html
@olivierdanhoffre5754
@olivierdanhoffre5754 Жыл бұрын
Congratulations ! It was not easy to summarize such a complex issue. I am not sure this riddle will ever be solved, not for technical reasons but idological ones . The denial of some kind of finalistic intelligent inherent to natural mechanisms make possible to go beyond mere description of facts.
@olivierdanhoffre5754
@olivierdanhoffre5754 Жыл бұрын
I mean "impossible" obviously...
@SEMF
@SEMF Жыл бұрын
We are glad you enjoyed this video! Michael's summary was certainly well made.
@yw1971
@yw1971 Жыл бұрын
4:50 - Missing the words 'as efficiently'. Or in other words - by better predicting the future
@SEMF
@SEMF Жыл бұрын
Interesting observation!
@gabbyappo1511
@gabbyappo1511 Жыл бұрын
So if a salamander was born with a deformed leg, that gets cut off, does it grow back a deformed leg or does it fix itself given another chance to grow the leg.
@SEMF
@SEMF Жыл бұрын
From what we learnt from Michael, it would depend on what caused the leg to be "deformed" in the first place.
@TropicalCoder
@TropicalCoder Жыл бұрын
Wow - that is a fundamental mystery there. It's as if - the tadpole _wants_ to be a frog. He puts his mind to the task. and wills his limbs into being.
@wcoenen
@wcoenen Жыл бұрын
See also "Growing Neural Cellular Automata". (I would provide an actual link, but youtube doesn't seem to like comments with links.)
@SEMF
@SEMF Жыл бұрын
Thanks very much for the suggestion!
@nishanthmurugan8084
@nishanthmurugan8084 8 ай бұрын
Not only cells have intelligence but i think DNA also has intelligence because it has goal directed behavior.some components of the cell like ribosome,mitochondria also have goal directed behavior.Is it possible that cellular components also have intelligence?
@SEMF
@SEMF 8 ай бұрын
Intelligence in the sense described here, absolutely! That's a very real possibility.
@robertsmyk4102
@robertsmyk4102 Жыл бұрын
Encoded in the DNA we might find a model of the organism with an adjustment that progresses with the development of the embryo to maturity. Because mitochondria circulate through the organism they may contain the fact checking and progress reports that are shared to ensure that features like limbs and brain hemispheres develop in physical and time symmetry. Studies of birth defects caused by chemical agents like thalidomide might be used to locate in the DNA where certain defects were generated and so locate the position of the model. Because feedback is expected to be in use the probability is that errors in feedback can produce some types of birth defects.
@SEMF
@SEMF Жыл бұрын
Interesting thoughts!
@909sickle
@909sickle 8 ай бұрын
Morphology would have to be this way, because there’s too many unknown influences to build by sequence. “Shapes” will be encoded as modes (not static targets). I would guess it’s encoded on the cell level. Default mode would just be split, and other modes would be based on signals. To find the encoded “shapes”, you would have to locate all mechanisms that respond to signals of any kind, in a reasonably reliable way. Forms would be encoded as a byproduct of a massive mode mode hierarchy that determines each cells current role in the total system. If all cells are essentially the same, but specialize based on signals, to encode new forms, it’s all about the mode hierarchy. The mode hierarchy is going to be insanely huge, so identifying the levels and branches will be the main challenge. Once identified, individual sections of it can be reprogrammed with the appropriate signals applied to the appropriate levels. But preventing reversion would be a challenge when trying to alter a grown body.
@SEMF
@SEMF 8 ай бұрын
That idea about modes is certainly plausible. Makes sense with the observed evidence.
@909sickle
@909sickle 8 ай бұрын
@@SEMF Thank you for your videos, Micheal is one of the most brilliant people I’ve heard speak. Since the mode-like cell behavior is not crazy, here is my guess for where the forms are stored. Assuming evolution is lazy/cheap, the easiest/cheapest way to encode physical functions (including “target form seekers”) would be to use the structure or “shape” of the control surfaces (the structures in cells that behave differently based on inputs; I don’t know the proper terms). This is explained at the end. Reading DNA is probably expensive, so you must store the real-time access information somewhere else. Putting all this together means you would expect DNA to encode instructions for an ultra general purpose biological machine that can copy itself, stay connected with, authenticate, and communicate with the copies, and change between a vast landscape machine types (resulting in a vaster landscape of possible behavior spaces), depending on its own state, signals from copies, and perhaps signals from non-copy “friendly” cells. You don’t design a body, you fine-tune a single super-cell that can copy itself and take on an infinite number of different roles/modes to fill its space in the environment. The cheapest way to store real-time morphology information (returning to the explanation) would be in the shape of the control surface, because its physical structure can be such that it reaches a natural balance for free. The analog thermostat example is appropriate. If the mercury has risen to the midpoint due to the temperature, you may ask “where is the form of 1/2 stored in the thermostat?” But of course it’s not, it’s encoded in the design of the control surface of the thermostat, which functions based on the environment it exists in. DNA would encode instructions for building a cell-building framework (some kind of super-proto-cell), that would encode or re-encode a specific morphology in its control surfaces based on what type of cell it is, based on signals from other cells and it’s own state. Since the real-time form/morphology information is encoded in the physical structure, it would not appear like data, even though its structure is data driven. At no point would you find anything that represents a body part shape because it would actually be represented by the control surface shape that seeks the proper steady state, for its purpose, at its location, for the purpose of resulting in the desired overall morphological shape (even though it has no knowledge of this grand purpose). The actual forms we see when looking at bodies would be meaningless side effects from the cells perspective. So, a person who is taller will have “taller” control surfaces. Not literally taller, but they will be constructed differently in a way that results in a steady state that results in a taller person. The control surface differences that encode real-time form information just by existing, could be revealed with machine learning by comparing them in detail (if detailed active-cell snapshots are possible) to the large scale morphologies, with enough properly tagged sample sets from one species. Cells would have to somehow periodically do an expensive “check” of the DNA to make sure the control surfaces are still shaped correctly, otherwise bodies would drift off into strange shapes as they take on damage, and quickly stop working (because of the hierarchical/recursive nature of the signal-response chains). You should also expect some kind of checksum or redundancy somewhere in this process. If true, altering DNA would be the most difficult way to manipulate forms, because you’re programming under several layers of abstraction. But it would be the most permanent. If you tried to manipulate the control surfaces, the form would revert after DNA checks. However, I suspect the surfaces are far more complex than this simplistic picture, and that there are infinite ways of manipulating the cell systems to capture new forms permanently by hacking the existing systems (coaxing the system into new steady states by pushing specific signals past expected boundaries; essentially causing overflow errors). Again, if true, every cell should know how to do *everything* that any other cell of the same species can do, if properly coaxed through the mode hierarchy.
@SEMF
@SEMF 8 ай бұрын
@@909sickle Thanks for the very detailed and interesting comment!
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