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Tom Rapoport (Harvard, HHMI) 2: How are cellular organelles shaped?

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Science Communication Lab

Science Communication Lab

Күн бұрын

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Eukaryotic cells have many different membrane-bound organelles with distinct functions and characteristic shapes. How does this happen? Dr. Tom Rapoport explains the important role of protein sorting in determining organelle shape and function.
In his first talk, Dr. Tom Rapoport explains that eukaryotic cells contain many membrane-bound organelles each of which has a characteristic shape and distinctive functions that are carried out by specific proteins. Most proteins are made in the cytosol but must move to different cellular destinations. Protein sorting is determined by signal sequences on the proteins that act as “zip codes”. Many proteins sort first to the endoplasmic reticulum (ER) before moving to other intracellular organelles or the plasma membrane. Rapoport explains that as a protein is translated, its signal sequence causes the nascent protein to insert into the Sec61 channel on the ER membrane. The polypeptide segment following the signal sequence will then be translocated across the membrane. Solving the structure of Sec61 channel allowed Rapoport’s lab to understand how proteins, which are typically hydrophilic, can be transported across a lipid membrane. It also helped them determine how Sec 61 differentiates between secreted proteins which need to be released into the ER lumen and transmembrane proteins which need to be anchored in the ER membrane. This improved knowledge of protein sorting helps us to better understand how organelles are formed and how they function.
The ER is a vast network that includes different domains with different functions. The rough ER consists of sheets with associated ribosomes and is involved in protein translation. The smooth ER consists of tubules and is important for lipid synthesis and Ca2+ transport. In his second talk, Rapoport explains how his lab identified proteins needed to generate and maintain a tubular ER network. They found two families of proteins that are required to form the high membrane curvature of tubules, and membrane-bound GTPases that fuse the tubules together into a network. The tubule-shaping proteins are also important in forming the edges of the ER sheets. In mammalian cells, however, another set of proteins is required to act as spacers between the membrane sheets. Using ultra-thin section electron microscopy, Rapoport’s lab, in collaboration with others, was able to show that stacked ER sheets are held together by helicoidal membrane connections forming a “parking-garage” like structure.
Speaker Biography:
Dr. Tom Rapoport has been a Professor of Cell Biology at Harvard Medical School since 1995 and a Howard Hughes Medical Institute Investigator since 1997. Prior to joining Harvard, Rapoport was a Professor at the Institute for Molecular Biology in East Berlin, which later became the Max-Delbrück Institute for Molecular Medicine. Rapoport received his PhD from Humboldt University of Berlin.
Rapoport’s research focuses on the understanding how organelles, in particular the endoplasmic reticulum (ER), derives its characteristic shape and performs its specific functions. He has had a long standing interest in how proteins are translocated across organelle membranes. His pioneering research has been recognized with many awards including the Max-Delbrück Medal in 2005, the Sir Hans Kreb Medal in 2007, and the Schleiden Medal in 2011, among many others. Rapoport is a member of the National Academy of Sciences, USA and the German Academy of Sciences, Leopoldina. He is also a Fellow of the American Association for the Advancement of Science (AAAS).
Learn more about Rapoport’s research here:
rapoport.hms.ha...
and here:
www.hhmi.org/s...

Пікірлер: 17
@medicinefuture
@medicinefuture 5 жыл бұрын
your work is really great, I am fond of your work, I want to know about the molecular mechanics, how molecules move to the target, what makes them move,
@TheZenytram
@TheZenytram 5 жыл бұрын
through a lot of different mechanism, endoplasmic reticulum ER, diffusion, change in temperature, through hydrophobic molecule, by microtubule with kinesin and dynein, by actin with myosin, a whole bunch of ways, keep digging in the iBiology channel and you with find out.
@medicinefuture
@medicinefuture 5 жыл бұрын
​@@TheZenytram Dear I think it is not simple as you explained, for example, if a protein is needed by A mitochondria it will be synthesized by ribosome and it will be sent to this mitochondria, how the ribosome or DNA in the nucleus at first knows that a mitochondria need that protein and how the protein was sent specifically to this mitochondria to replenish the lost component, you have here space-time arrangement, and do not tell me that a signal was sent , there are millions or more substances dissolved and undissolved in the cytoplasm which is so difficult to transmit a chemical signal in such a medium without distortion of that signal, chemistry here cannot explain.
@maverickross-girard7630
@maverickross-girard7630 5 жыл бұрын
@@medicinefuture When a protein concentration is low, the lack of the protein may activate or inhibit other proteins, thus propagating a signal like a game of Chinese whispers with great efficacity. The lack of the protein may activate the transcription from DNA to RNA of the protein's code and then the translation from RNA to the polypeptidic chain/protein. You might enjoy reading Molecular Biology of the Cell from Garland Science. There is information about signalisation.
@eleonoraparra3672
@eleonoraparra3672 5 жыл бұрын
phys.org/news/2019-07-protein-sensing-mechanism.html life is still a huge mystery :)
@mmartin5816
@mmartin5816 5 жыл бұрын
Fantastic talk about a poorly understood phenomena. Still, I wonder what role cytoskeletal proteins play in the organization of the ER. How are mRNAs spatially localized to specific locations within the ER and the cell?
@FabianRomano1
@FabianRomano1 4 жыл бұрын
Hi Martin. The microtubule cytoskeleton is not essential to form an ER network. You can start an in vitro ER formation reaction (xenopus egg extract), in the presence or absence of Nocodazol so no microtubules are present, and ER formation happens efficiently in both cases. That was part of the supplemental data on the 2013 JCB paper cited in the presentation. The cytoskeleton definitely plays a role in organizing and distributing the ER within cells though, there's plenty of evidence for that. Cheers.
@numericalcode
@numericalcode Жыл бұрын
Organelle research has an interesting history
@medicinefuture
@medicinefuture 5 жыл бұрын
here you don't show how the organelles formed, you just explained what happens, if you really want to show us- how- you must explain why this 3d shape(and not other) is formed like this what is the force which forms this shape
@InquilineKea
@InquilineKea 2 ай бұрын
ER tubules/sheets look NOTHING like how they're portrayed..
@CandidDate
@CandidDate 2 жыл бұрын
One comment, this is all top-down analysis. What about bottom-up? From the basic form of a "vesicle" and what is contained in the vesicle, we can build all of the formations in the cell and body. I propose H2O is the primary vesicle, the female, and DNA is the primary male part. Veins and arteries are stacked vesicles, and blood is the primary male component. The digestive system is the primary female vesicle, and food and poop are the male components. ER is helical because it is a fractal of the DNA helix. DNA is the male and ribosomes are the female. Do you see what I'm getting at? Binary! It is all binary! Likewise, the lungs convert the male oxygen through the female structures into energy. The ER is the fractal lung of the cell. What is the primary function of the cell? Input and output. Input is the environment and energy, output is waste. The function of the cell is homeostasis. Bottom-up, we are all female and male components of the primary elements. Elements are carbon, nitrogen, oxygen, hydrogen, etc. Look into cellular automata for the way DNA is translated into female vesicles and male parts.
@InquilineKea
@InquilineKea 2 ай бұрын
"tubules/positive membrane" are energetically unfavorable wow
@magisgaming
@magisgaming 3 жыл бұрын
No
@darinkamercado7662
@darinkamercado7662 4 жыл бұрын
Por favor en español 😣
@FabianRomano1
@FabianRomano1 4 жыл бұрын
Hola Darinka, soy Fabian Romano, autor de algunos de los papers en la presentacion. (Tom muestra experimentos mios entre 17:40 y 20:00). Voy a ofrecerme para hacer subtitulos en espanol ! (usando un teclado espanol por supuesto =) ). Gracias por comentar, Saludos !
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